Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02864 ATGCCAATGGAGTTCGTTCTTCAACATGTTGAACCTTCAACTCTTATTTTTCTTCTCATCACTCTCACAACTCTTGTTATCTTTTCACTCACTTTTCGTAAGAAAAAACTCCCATACCCACCAGGCCCAAAAGGTTTACCCATCATAGGGAACATGTTGATGATGGACCAGCTAACTCACCATGGTATGGCCAAGCTGGCTGAAAAATACGGCGGATTCTGCCACCTACAAATGGGTGTCATCCACATTGTGGCCGTTTCGACTCCTGAAATGGCCCGAGAAGTCCTTCAAGTCCAAGATGGTGTTTTCGCGAATCGGCCGGCCAATATTGCAATTACGTACCTAACATATGACCAGGCCGATATGGCGTTCGCGAATTACGGTCCGTTTTGGAGGCAAATGCGAAAGATATGTGTCATGAAACTTTTCAGCCGTAAACGGGCTGAATCTTGGGCTTCCGTAAGAGAGGAAGTCGAGACAACGGTTCAAACCGTTGCCTCGAAAATAGGTTTGCCTGTTAATTTAGGTGAACTGATATTCTCTCTTACGAGAAGTATCACCTTTAAGGCTGCGTTCGGGTCGAATCTCAATAAAGGACAAGATGAATTTATGGGAATTTTGCAAGAATTTTCTAAGCTTTTCGGAGCATTCGACATCGCTGAATTTCTTCCTTGGTTGGGTTGGTTCAATGGACAGGATTTCAATAAAAGATTGGCTAGTGCAAGAAAAGCTCTTGATGTGTTTATTGATGAGATAATTGATGATCATGTGACAAAGAGGAAGAATAGCATGGAGAATAAAGATAGTGAGAATGAAGGTGATGAAGATATGGTTGATGAATTAATGGCGTTTCTTGATGAGAGCGGTGTTAATGCTGCGGAAACTTCACAATCCACGCTCAAGCTTACTAGAGATAATATCAAAGCGCTTATCATGGACGTGATGTTTGGTGGAACTGAGACAGTAGCATCAGTGATAGAATGGACAATGGCCGAACTCATGAAAAGCCCAAAAGATCTTCAAAGGATTCAACAAGACCTTGCCGATGTTATAGGATTGGATCGAAGATTCAACGAAACCGATCTAGAAAACTTACCATTTCTCAAATGCATTATCAAAGAAACACTTCGACTGCACCCTCCAATTCCTCTACTTCTCCACGAGACAGTAGAAGACACTACCGTCTCAGGTTACTTTATCCCAAAGTCAACACGCGTTATGATAAACGCGTGGGCGATTGGACGTGACAAAAACGCGTGGGAAGAGCCGGAGAAATTCAACCCTTCAAGATTTTTGAATGAGGGTATGCCAGATTTCAAAGGAAGTAACTTTGAGTTCATTCCATTTGGGTCAGGAAGAAGGTCATGTCCAGGGATGCAACTTGGACTGTATGGTGTGGACATAGCCGTGGCTAATTTGCTTCATTGTTTCAATTGGGAGTTGCCTAATGGAATGAAACCAAGTGAGCTTGATATGAATGATGTGTTTGGTCTCACTGCTCCTAGAGCTGTTCAGCTTGTTGCTGTACCTAGTTACCGTCTCAATTGTCCTCTTTGA 1557 0.4284 MPMEFVLQHVEPSTLIFLLITLTTLVIFSLTFRKKKLPYPPGPKGLPIIGNMLMMDQLTHHGMAKLAEKYGGFCHLQMGVIHIVAVSTPEMAREVLQVQDGVFANRPANIAITYLTYDQADMAFANYGPFWRQMRKICVMKLFSRKRAESWASVREEVETTVQTVASKIGLPVNLGELIFSLTRSITFKAAFGSNLNKGQDEFMGILQEFSKLFGAFDIAEFLPWLGWFNGQDFNKRLASARKALDVFIDEIIDDHVTKRKNSMENKDSENEGDEDMVDELMAFLDESGVNAAETSQSTLKLTRDNIKALIMDVMFGGTETVASVIEWTMAELMKSPKDLQRIQQDLADVIGLDRRFNETDLENLPFLKCIIKETLRLHPPIPLLLHETVEDTTVSGYFIPKSTRVMINAWAIGRDKNAWEEPEKFNPSRFLNEGMPDFKGSNFEFIPFGSGRRSCPGMQLGLYGVDIAVANLLHCFNWELPNGMKPSELDMNDVFGLTAPRAVQLVAVPSYRLNCPL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02864 518 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02864 518 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02864 518 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02864 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Vivi5g02864 518 SUPERFAMILY Cytochrome P450 40 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02864 518 Gene3D Cytochrome P450 31 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02864 518 PANTHER CYTOCHROME P450 84A1-RELATED 11 518 - -
Vivi5g02864 518 Pfam Cytochrome P450 40 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02864 518 FunFam Cytochrome P450 84A1 32 512 - -
Vivi5g02864 518 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02864 518 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02864 518 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02864 518 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02864 518 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02864 518 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02864 518 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02864 518 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02864 518 CDD CYP71-like 69 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02864 Vivi-Chr5 115831940 115835081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02864 47 518 Monolignol Biosynthesis Gene Families AT4G36220 68.143 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02864 K09755 - pop:7494301 731.48