Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02822 ATGGGAGAGGTAGCGCGTGGAGGTTGTTGTCCTCCGATGGATCTGTTCCGTTCGGAGCCGATGCAACTGATTCAGCTCATCATTCCCATCGAATCCGCTCACTGCACTGTCTCCTACCTCGGTGACCTTGGCCTTCTTCAGTTTAAAGATCTCAATTCAGAGAAGAGCCCCTTTCAACGAACTTATGCAACTCAGATAAAAAGATGTGGAGAGATGGCTCGTAAGTTGCGTTTCTTCAAGGAGCAAATGCTTAAGGCAGGTGTTTCCCCAAAAGATTCCACAGCACAGGTTGATGTGAACATCGATGACCTTGAGATAAAACTTTCAGAAATCGAGTCTGAGTTAACTGAGATGAATGCAAATGGTGAAAAGTTGCAACGCACATACAATGAACTTGTTGAGTATAAGCTTGTTCTTCAGAAGGCTGGTGACTTTTTCCACTCAGCTCAAAGCCGTGCCATAGAGCAGCAAAGAGAATATGAGTCACGCCAACTGAGTGGGGATTCTATGGAAGTACCTTTATTACAGGACCAAGAATTACCAGGTGATTCATCAAAGGCAGTTAAGTTGGGATTTTTAGCTGGTCTCGTTCCCAGGGAAAAGTCCATGGCATTTGAGAGAATTTTATTTCGTGCTACTAGAGGCAATGTATTTTTGAGGCAGACTACTGTTGAGGATCCGGTTACAGACCCTGTTTCTGGAGAAAAGACTGAGAAAAATGTTTTTGTCGTCTTTTACGCTGGTGAAAAAGTGAAAGCCAAGATTCTGAAAATCTGTGATGCCTTTGGTGCCAATCGATACCCGTTTGCTGAGGAGCTTGGAAAACAAGCTCAAATGATTACGGAGGTTTCTGGAAGGCTTACAGAATTGAAGACCACCATAGATGCTGGACTTTCGCACCGAGTTAACTTGCTGGAAAATCTTGGGACTCAATTCGAGCAATGGAATCTTTTGGTGAGGAAGGAGAAATCCATCCACCATACCCTGAACATGCTGAGCCTTGATGTGACGAAAAAATGTCTAGTAGCTGAGGGGTGGAGTCCCGTTTTTGCAACAAATCAGGTCCAGGATGCATTACAGCGGGCTTCAAAGGACTCTAACTCCCAAGTCAGTGCTATTTTGCAAGTTTTACATACCAGAGAGTTGCCACCTACCTACTTTCGCACGAACAAATTTACGTCTTCGTATCAAGGAATTATAGACTCATATGGGGTTGCTAAATATCAAGAGGCAAATCCTACTGTGTTTACTGTAGTTACCTTTCCATTTCTTTTCGCTGTAATGTTCGGTGATTGGGGGCATGGAATATGTTTACTGCTGGCAGCTCTATATTTCATAATCAGGGAGAAGAAACTTTCTAGCCAGAAGCTTGATGACATCACAGATATGACTTTTGGAGGTCGCTATGTTATTTTCATGATGTCACTCTTCTCGATCTACACTGGCCTGATCTATAACGAGTTCTTTTCTGTTCCATTTGAACTCTTTGGCCCCTCTGCATATGCGTGCCGTGACCTTTCTTGCAGGGATTCTACCACAATAGGGCTGATAAAAGCGCGTCGCACTTACCCTTTTGGAGTGGATCCTGTATGGCATGGTACACGTAGTGAATTACCATTCCTGAACTCTTTGAAAATGAAAATGTCAATTCTTCTTGGGGTTGCTCAAATGAACCTTGGAATTATAATGAGCTATGCCAATGCCAGGTTCTTTAAGAACCACGTAAATGTATGGTTCCAATTTATCCCCCAGGTGATCTTTCTTAACAGTCTATTTGGCTACCTATCCCTCCTTATCATTGTGAAGTGGATCACGGGTTCTCAAGCTGATTTGTACCATGTAATGATCTACATGTTCTTGAGTCCAACAGATGATTTGGGCGAGAACCAACTCTTCGAGGGTCAGAAAAATCTTCAGCTCGTGCTTCTGCTTCTGGCTTTTGTCGCCGTGCCCTGGATGCTGTTGCCAAAACCCTTTATTTTGAAGAAACAACATGAAGCTAGGCACGAAGAAGAATCCTATGCACCACTTTCAAACACAGAGGAAAGCTTGCAGGTGGAATCAAATCATGATTCCCACGGTCATGCGGAATTCGAGTTCAGTGAAATTTTTGTACATCAACTCATACACACTATAGAATTTGTACTTGGAGCAGTATCTAATACAGCTTCTTACCTTCGTCTGTGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAAGTGTGTTCTACGAGAAGGTTCTGCTTATGGCATGGGGGTACAATAATTGGCTTATCCTGATAGTGGGTCTCATTGTTTTCATTTTCGCAACCGTTGGAGTGTTACTTGTCATGGAAACTCTGAGTGCCTTCTTGCATGCATTGAGGCTTCACTGGGTGGAGTACCAAAACAAGTTTTATGAAGGAGATGGTTACAAGTTCCACCCTTTCTCGTTCACATTGCTAGACGAAGAGGATGAGTTGATATAA 2466 0.4327 MGEVARGGCCPPMDLFRSEPMQLIQLIIPIESAHCTVSYLGDLGLLQFKDLNSEKSPFQRTYATQIKRCGEMARKLRFFKEQMLKAGVSPKDSTAQVDVNIDDLEIKLSEIESELTEMNANGEKLQRTYNELVEYKLVLQKAGDFFHSAQSRAIEQQREYESRQLSGDSMEVPLLQDQELPGDSSKAVKLGFLAGLVPREKSMAFERILFRATRGNVFLRQTTVEDPVTDPVSGEKTEKNVFVVFYAGEKVKAKILKICDAFGANRYPFAEELGKQAQMITEVSGRLTELKTTIDAGLSHRVNLLENLGTQFEQWNLLVRKEKSIHHTLNMLSLDVTKKCLVAEGWSPVFATNQVQDALQRASKDSNSQVSAILQVLHTRELPPTYFRTNKFTSSYQGIIDSYGVAKYQEANPTVFTVVTFPFLFAVMFGDWGHGICLLLAALYFIIREKKLSSQKLDDITDMTFGGRYVIFMMSLFSIYTGLIYNEFFSVPFELFGPSAYACRDLSCRDSTTIGLIKARRTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIMSYANARFFKNHVNVWFQFIPQVIFLNSLFGYLSLLIIVKWITGSQADLYHVMIYMFLSPTDDLGENQLFEGQKNLQLVLLLLAFVAVPWMLLPKPFILKKQHEARHEEESYAPLSNTEESLQVESNHDSHGHAEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLMAWGYNNWLILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEYQNKFYEGDGYKFHPFSFTLLDEEDELI 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02822 821 PANTHER VACUOLAR PROTON ATPASES 15 817 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vivi5g02822 821 Coils Coil 94 128 - -
Vivi5g02822 821 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vivi5g02822 821 PIRSF ATP6V0A1 11 820 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02822 Vivi-Chr5 115129754 115139991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02822 13 819 Primary Pumps ATPases(2) AT2G21410 77.599 0.0 1310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02822 K02154 - gmx:100810062 1434.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02822 5 115129754 115139991 Vivi5g02822 5 115129754 115139991 ECH