Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi5g02801 | ATGCCTAGCATGGCTTCCTCTCTTCTTCTTCCCTTTTATTCTACTTGTGGTAAAATTCATTCTCTTAATGCTGCTCCTCAAGGCATTTCTGTTAGAAGATTTGTTCTTAACGTGAAATCCTCAAAGACAAGAGAATCCACTTCTAATGCTAATGATAATGCCATGTTTAATACCAATTCACGTAGAGACTTTCTTGGATTAGCATTAGGAGGAGTCTCTACACTCCTCATCCATTCATTTGATGCTGCCAATGGAGCTGGTTTGCCACCAGAAGAAAAACCTAAACTATGTGACAATACTTGTGAGAAAGAGCTTGAAAATGTACCTGTGGTAACTACTGAATCAGGTTTGCAATACAAGGATATTAAAGTTGGGCAAGGACCCAGTCCACCAGTTGGATTTCAGGTGGCTGCTAATTATGTTGCAATGGTTCCATCTGGACAAATATTTGATAGTTCATTGGAGAAAGGCCAACTTTACATTTTTCGAGTTGGATCTGGTCAGGTGATAAAAGGACTGGATGAAGGTCTTTTAAGCATGAAAGTAGGCGGGAAACGTCGGCTGTACATACCTGGATCATTGGCATTTCCAAAAGGGATTAATTCTGCACCAGGAAGACCAAGGGTGGCTCCAAATAGTCCAGTTATATTTGATGTAAGTTTGGAATATGTACCCGGACTTGACGTCGACGAGGAATAA | 699 | 0.4063 | MPSMASSLLLPFYSTCGKIHSLNAAPQGISVRRFVLNVKSSKTRESTSNANDNAMFNTNSRRDFLGLALGGVSTLLIHSFDAANGAGLPPEEKPKLCDNTCEKELENVPVVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGQLYIFRVGSGQVIKGLDEGLLSMKVGGKRRLYIPGSLAFPKGINSAPGRPRVAPNSPVIFDVSLEYVPGLDVDEE | 232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi5g02801 | 232 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 133 | 225 | IPR001179 | GO:0003755 | |
| Vivi5g02801 | 232 | SUPERFAMILY | FKBP-like | 99 | 221 | - | - | |
| Vivi5g02801 | 232 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 85 | 225 | - | - | |
| Vivi5g02801 | 232 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 133 | 221 | IPR001179 | GO:0003755 | |
| Vivi5g02801 | 232 | Gene3D | - | 91 | 224 | IPR046357 | GO:0003755 | |
| Vivi5g02801 | 232 | FunFam | Peptidylprolyl isomerase | 105 | 223 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi5g02801 | Vivi-Chr5 | 114727030 | 114728717 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vivi5g02801 | 114 | 221 | Calmodulin-binding Proteins | AT3G25230 | 36.697 | 1.41e-12 | 64.7 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi5g02801 | K01802 | - | gmx:100818743 | 355.14 |