Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02773 ATGGTTGAAGTGGATAGCATGCCTGATGTAAACAGAGAAGAAGAAAGTTCTGCCGAACCAACTTACAAACAAGACCAAGATGGTAACATGACTCACGATTTCTCCGGAGCGTTAACAATAGCCTCGGAAGTTCTCCCACTATCGGTCGCTTCTGCTGACGAGCCCTATGTGGGTCAGGAGTTTGAGTCGGAAGCAGCAGCACATGCATTTTATAATGCATACGCAGCCGAGGTTGGATTCATCATACGTGTAAGCAAACTCTCGCGGTCAAGGCGTGACGGAACTGCTATTGGACGCGCTCTTGTTTGCAACAAAGAGGGTTACAGAATGCCCGACAAGCGCGAAAAGATCGTTAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTATGGTGAGGAAAGTTGGTTCTGGTAAATGGGTTGTTACGAAGTTTGTGAAGGAGCACACTCATCCCTTGAATCCTGGAAGTGGTAGAAGGGATTGCATGTTTGAACAATATCCGTCTCAGAGCGAGCACGATAAAATCCGCGAACTATCTCAGCAATTGGCAATCGAGAAAAAGCGGTCAGTGACTTATAAAAGACAACTTGAAGTGATATTCGATTATATCGAGGAGCACAATGTGAGCCTTTCAAAGAAAATACAACACATAGTAGACAGTGTGAAGCAGATGGAACCTAAAGAAGAAGAACACAATCATTCATAG 714 0.4524 MVEVDSMPDVNREEESSAEPTYKQDQDGNMTHDFSGALTIASEVLPLSVASADEPYVGQEFESEAAAHAFYNAYAAEVGFIIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMIMVRKVGSGKWVVTKFVKEHTHPLNPGSGRRDCMFEQYPSQSEHDKIRELSQQLAIEKKRSVTYKRQLEVIFDYIEEHNVSLSKKIQHIVDSVKQMEPKEEEHNHS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02773 237 MobiDBLite consensus disorder prediction 1 21 - -
Vivi5g02773 237 MobiDBLite consensus disorder prediction 1 33 - -
Vivi5g02773 237 Pfam FAR1 DNA-binding domain 70 157 IPR004330 -
Vivi5g02773 237 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02773 Vivi-Chr5 114292499 114295154 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi5g02773 FAR1 7.4e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02773 - - gmx:100806900 345.51