Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02772 ATGGAGTTAGGGATTGATGATTCTGTTAATGGTGATACGTTAAGAGATGCTGCCATGGTTGAAGTGGATAGCATGCCTGATGTAAACAGAGAAGAAGAAAGTTCTGCCGAACCAACTTACAAACAAGACCAAGATGGTAACATGACTCACGATTTCTCCGGAGCGTTAACAATAGCCTCGGAAGTTCTCCCACTATCGGTCGCTTCTGCTGACGAGCCCTATGTGGGTCAGGAGTTTGAGTCGGAAGCAGCAGCACATGCATTTTATAATGCATACGCAGCCGAGGTTGGATTCATCATACGTGTAAGCAAACTCTCGCGGTCAAGGCGTGACGGAACTGCTATTGGACGCGCTCTTGTTTGCAACAAAGAGGGTTACAGAATGCCCGACAAGCGCGAAAAGATCGTTAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTATGGTGAGGAAAGTTGGTTCTGGTAAATGGGTTGTTACGAAGTTTGTGAAGGAGCACACTCATCCCTTGAATCCTGGAAGTGGTAGAAGGGATTGCATGTTTGAACAATATCCGTCTCAGAGCGAGCACGATAAAATCCGCGAACTATCTCAGCAATTGGCAATCGAGAAAAAGCGGTCAGTGACTTATAAAAGACAACTTGAAGTGATATTCGATTATATCGAGGAGCACAATGTGAGCCTTTCAAAGAAAATACAACACATAGTAGACAGTGTGAAGCAGATGGAACCTAAAGAAGAAGAACACAATCATTCATAG 768 0.4492 MELGIDDSVNGDTLRDAAMVEVDSMPDVNREEESSAEPTYKQDQDGNMTHDFSGALTIASEVLPLSVASADEPYVGQEFESEAAAHAFYNAYAAEVGFIIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMIMVRKVGSGKWVVTKFVKEHTHPLNPGSGRRDCMFEQYPSQSEHDKIRELSQQLAIEKKRSVTYKRQLEVIFDYIEEHNVSLSKKIQHIVDSVKQMEPKEEEHNHS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02772 255 MobiDBLite consensus disorder prediction 15 48 - -
Vivi5g02772 255 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 245 - -
Vivi5g02772 255 Pfam FAR1 DNA-binding domain 88 175 IPR004330 -
Vivi5g02772 255 MobiDBLite consensus disorder prediction 25 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02772 Vivi-Chr5 114292499 114295163 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi5g02772 FAR1 8.7e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02772 - - gmx:100806900 365.925