Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02763 ATGGGGCATAGTTCGAATAAGAAGAAGCGAGGAGGTGGAAGAAGAAACAAGTCAAGAACACCTTCCAAAGATAACAATTCGCAATTCGGAAACGGTGATGATAACGAACAACTCTCCGAAGAGATTACTGCACTATGTGCGATTTTTCAAGAGGATTGTGAAATTATTCCTGGATCGCCTGCTCAAATAGTTATTAAACTCAGGCCTTACTCGAATGACATGGGCTATGAGGATGTGGATGTTTCTGCTGTTCTCGTTGTTAGGTGCTTGCCTGGGTATCCCTTCAAATGTCCCAAGTTGCAAGTTACTCCTGAAATGGGTTTATCACAAACTGATGCTGATAAACTTTTGTCTCTCCTTGTTGATCAGGCCAATTTAAATGCGAGGGAGGGACGAGTAATGATCTTTAATTTAGTTGAGGCTGCTCAAGAATTTCTGTCTAGAATTGAGCCTATTGCCAAACCAACTGAATCTAAGTTTTTACACTCAACTGCAGAAGGCATTGAAGAACTGTGTCCCAAAGATATGGCATCTTCAAATAAGAATAGATCTTTTGTTTATGGTTTCGTCGACCTTTTCAGTGGCTATGGAGAGTTCTGGAATTGGGGTTTTGGAATTGATGAAACTGCTGTAAAAAGTTCTTCTATTCCTTCTTCTAAGTTGGATGCCTCCGCATTACGAATAGAAACCCGGGAAAAGAAATCTGATGGCAAGGAAGACCCGTTCATATTGCAAGAACTTCCTGTCAAATTAGATACTGTAGGAGAAGTTAGTGAAGACAGCTTATCTTTGACTTGTTCAAGTAGATCTTTGGTGGGTGATTTTGCGGAGAACGACACAGAAGGTGAGAAAGAGTATTCTATGTTTGACGAGTATACAACTGAGGATAGCAAAGGTATATCTGACAGCGAATCTACAGAGTCTCTGTCTTCTGTGTCCTTGCCTCATCACCAGGCATCTCAAATAGAAAAGGATCTACTAATGGTTCACTTACTTCGCATTGCTTTGGCCTCTGAAGGCACATTGCCCGACTCTTTGCCCCAAATAGCAACGGAGCTGGACCATTTAGGGTTCGTTTCTGACTCAACACGGGTTATGGCATCAAAACCGTCTTCTCTTTTCAACAAAACCTTTGATCATATCATCAAGAAACAACCGGCATTATCCAAAATATCTCAATTGTGGACATCTTCTGATCTTGGAAGCTCTAATACTGCTCACAATAGTTCTCGATATTTAAGTGATTTTGAGGAGCTACGCCCCCTTGGTCATGGTGGTTTTGGTCATGTTGTGCTGTGCAAAAATAAACTCGATGGAAGGCAGTATGCAATGAAGAAAATTCGCCTTAAGGACAAAACCATGCGTGACCGAATATTAAGGGAAGTAGCTACACTTTCTCGTTTACAACATCAACATGTTGTTCGATATTATCAGGCATGGTTTGAAACTGGCGTAACTGATTCTTATGGTGATCTAACTGGAGATTCAAGAACTCCAGCGAGTTCTACTTTCAGTTACAAAGGTACAAGCTCCGCTGATACTATTGGGCGTGAGAATCAACTTGAATCAACGTATCTTTATATACAAATGGAGTACTGTCCCATGACTCTTCGCCAGATGTTTGAATCATATAGTCATTTAGACAAAGAACTGGCATGGCATTTGTTTCGCCAAATAGTAGAAGGTTTGGCACACATACATGGGCAAGGAATAATTCATCGGGATTTAACACCAAGTAACATATTCTTTGATGCTCGCAATGATATTAAAATCGGTGACTTTGGTCTTGCCAAGTTCTTGAAGTTGGAGCAGGTGGATCAAGATTCAGCCCATCTTGCTGATACAATTGGAGTTTCCATTGATGGCACTGGACAAGTAGGGACATATTTCTATACAGCTCCTGAAATTGAGCAAGGATGGCCTAAGATTGATGAAAAGGCTGACATGTACAGCTTAGGAGTGATATTTTTTGAGCTTTGGCATCCATTTGGGACAGCAATGGAGAGACACGTGATTTTATCCGATCTGAAACAAAAAGCTGGGCTTCCACCTGCTTGGGTTGCTGAGTTTCCAGAACAGGAATCCTTGCTACGGAAGCTAATGTCTCTAGGTCCCTCTGATCGCCCATCTGCCAATGAACTTCTGAAGAACGCATTTCCTCCACGAATGGAGTCTGAAATTTTCGATGATATGTTGCGAACAATGCTGAAATCAGAAGATAGAAGCATTTACGATAAAGTTTTAAATGCTATCTTTGATGAAGAAATGTTAAGCTCAAAGCACATTCAGCAAGTTGGTAGATTAGGGTCAGTTGGAGATAACAATTCGTCCATTCAACACACGGATTTTGTAACCCAAGTTCGAGATTACGTTGTAGATGTCAGCAAGGATATTTTCAGACAACATTGTGCTGAACATCTAAAATTATTACCGATTCGTTTATTGGATGATTGTCCGCAGTTTAATAGAAATGCAGTTAAACTTCTAACCCTTGGAGGAGACATGCTTGAACTTTCCCATGAGCTGCGTTTGCCTTTTGTGAATTGGATTATATCTAACCAGAAATCTTCATTCAAACGATATGAGATATCATACGTTTACAGAAGAGCAATTGGGCATTCATCACCAAACTGCTACCTTCAGGGAGATTTTGACATTATTGGTGGCACTTCAGTATTGACAGAGGCAGAGGTCATAAAGGTCACGAAGGACATAGTCATTTGTTTTTTCCATGAAAATTCATGTGACATTCATCTAAACCATGCTGACCTACTGGATGCAATTTGGTCATGGACTGGAATCAGGGTAGAACACAGATTTAAAGTAGCAGAGCTTCTTTCAATGATGAATTCTTTGCGTCCTCAATCCCCAGAAAGGAAATCAAAATGGGTAGTGATAAGGCGACAACTTTTGCAGGAACTGGGTTTAGTTGAAGCTATGGTGAATAGGTTACAAACGGTAGGTTTGAGATTTTGTGGATCTGCAGACCAGGCTCTTCCTAGACTAAGGGGAGCTCTACCATCTGATAAGCGAACCTTAAAGGCACTTGATGAATTGTCTGAGCTTGTCCGTCTCTTGAGAATTTGGAGGATTGACAAAAATGTATATATAGATGCATTAATGCCGCCAAATGAAAGTTATCATAGAGATTTGTTTTTTCAGGTATATTCAAGGAAGGAGAATAGTCCTGGATCACCCTCTGAGGGTGTCTTGCTAGCTGTTGGTGGTCGATATGACTATTTGCTTCATCAGTTTAGGAGCAGTGACTATAAAGGAAATCTTCCCACTGGTGTAGGGACTAGCCTTGCCTTAGAGACGATAATTCAGAATTGTTCGGTACCTAATCGAAATGAAGCAAGCATCAAGATTCTTGTGTGCTCAAGAGGAGGAGGTGGTCTGTTGGTGGAGCGCATGGAACTAGTTTCTGAATTATGGCGGGAGAAGTTTAAGGCCGAATATGTCCCTGTCCCTGATCCAAGTCTTACAGAGCAATATGAGTACGCTAATGAACATGATATCAAATGCCTCGTTATTATTACGGATGCAGGTTTCTCCCTGACTGATTCAGTTAAGGTTCGACATCTTGAACTTAAGAAGGAGAAAAATGTTGAGAGAGAGAACCTAGTCAAGTTTCTATCAGATGCAATGGCAACACAATTTAGAAACCCCTCCATATGGGTTTGA 3684 0.4091 MGHSSNKKKRGGGRRNKSRTPSKDNNSQFGNGDDNEQLSEEITALCAIFQEDCEIIPGSPAQIVIKLRPYSNDMGYEDVDVSAVLVVRCLPGYPFKCPKLQVTPEMGLSQTDADKLLSLLVDQANLNAREGRVMIFNLVEAAQEFLSRIEPIAKPTESKFLHSTAEGIEELCPKDMASSNKNRSFVYGFVDLFSGYGEFWNWGFGIDETAVKSSSIPSSKLDASALRIETREKKSDGKEDPFILQELPVKLDTVGEVSEDSLSLTCSSRSLVGDFAENDTEGEKEYSMFDEYTTEDSKGISDSESTESLSSVSLPHHQASQIEKDLLMVHLLRIALASEGTLPDSLPQIATELDHLGFVSDSTRVMASKPSSLFNKTFDHIIKKQPALSKISQLWTSSDLGSSNTAHNSSRYLSDFEELRPLGHGGFGHVVLCKNKLDGRQYAMKKIRLKDKTMRDRILREVATLSRLQHQHVVRYYQAWFETGVTDSYGDLTGDSRTPASSTFSYKGTSSADTIGRENQLESTYLYIQMEYCPMTLRQMFESYSHLDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPSNIFFDARNDIKIGDFGLAKFLKLEQVDQDSAHLADTIGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVIFFELWHPFGTAMERHVILSDLKQKAGLPPAWVAEFPEQESLLRKLMSLGPSDRPSANELLKNAFPPRMESEIFDDMLRTMLKSEDRSIYDKVLNAIFDEEMLSSKHIQQVGRLGSVGDNNSSIQHTDFVTQVRDYVVDVSKDIFRQHCAEHLKLLPIRLLDDCPQFNRNAVKLLTLGGDMLELSHELRLPFVNWIISNQKSSFKRYEISYVYRRAIGHSSPNCYLQGDFDIIGGTSVLTEAEVIKVTKDIVICFFHENSCDIHLNHADLLDAIWSWTGIRVEHRFKVAELLSMMNSLRPQSPERKSKWVVIRRQLLQELGLVEAMVNRLQTVGLRFCGSADQALPRLRGALPSDKRTLKALDELSELVRLLRIWRIDKNVYIDALMPPNESYHRDLFFQVYSRKENSPGSPSEGVLLAVGGRYDYLLHQFRSSDYKGNLPTGVGTSLALETIIQNCSVPNRNEASIKILVCSRGGGGLLVERMELVSELWREKFKAEYVPVPDPSLTEQYEYANEHDIKCLVIITDAGFSLTDSVKVRHLELKKEKNVERENLVKFLSDAMATQFRNPSIWV 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02763 1227 FunFam eIF-2-alpha kinase GCN2 778 1114 - -
Vivi5g02763 1227 CDD STKc_EIF2AK4_GCN2_rpt2 409 716 - -
Vivi5g02763 1227 ProSiteProfiles Protein kinase domain profile. 416 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g02763 1227 MobiDBLite consensus disorder prediction 282 302 - -
Vivi5g02763 1227 ProSiteProfiles RWD domain profile. 40 149 IPR006575 GO:0005515
Vivi5g02763 1227 SUPERFAMILY Protein kinase-like (PK-like) 412 724 IPR011009 -
Vivi5g02763 1227 SUPERFAMILY Class II aaRS ABD-related 1122 1217 - -
Vivi5g02763 1227 FunFam Histidine--tRNA ligase, cytoplasmic 1118 1217 - -
Vivi5g02763 1227 Gene3D Ubiquitin Conjugating Enzyme 28 155 IPR016135 -
Vivi5g02763 1227 ProSitePatterns Protein kinases ATP-binding region signature. 422 445 IPR017441 GO:0005524
Vivi5g02763 1227 MobiDBLite consensus disorder prediction 1 16 - -
Vivi5g02763 1227 Gene3D Bira Bifunctional Protein; Domain 2 780 1116 IPR045864 -
Vivi5g02763 1227 MobiDBLite consensus disorder prediction 282 315 - -
Vivi5g02763 1227 Gene3D - 1118 1217 IPR036621 -
Vivi5g02763 1227 FunFam eIF-2-alpha kinase GCN2 404 532 - -
Vivi5g02763 1227 PANTHER HISTIDYL-TRNA SYNTHETASE 781 1221 - -
Vivi5g02763 1227 SMART RWD2001b 40 149 IPR006575 GO:0005515
Vivi5g02763 1227 FunFam eIF-2-alpha kinase GCN2 536 729 - -
Vivi5g02763 1227 Pfam Protein kinase domain 416 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g02763 1227 SUPERFAMILY UBC-like 34 146 IPR016135 -
Vivi5g02763 1227 ProSitePatterns Tyrosine protein kinases specific active-site signature. 571 583 IPR008266 GO:0004672|GO:0006468
Vivi5g02763 1227 Gene3D Phosphorylase Kinase; domain 1 404 532 - -
Vivi5g02763 1227 FunFam eIF-2-alpha kinase GCN2 31 155 - -
Vivi5g02763 1227 Pfam RWD domain 36 146 IPR006575 GO:0005515
Vivi5g02763 1227 Gene3D Transferase(Phosphotransferase) domain 1 535 727 - -
Vivi5g02763 1227 SUPERFAMILY Class II aaRS and biotin synthetases 786 1109 IPR045864 -
Vivi5g02763 1227 Pfam Histidyl-tRNA synthetase 884 1107 IPR041715 -
Vivi5g02763 1227 Pfam Anticodon binding domain of tRNAs 1121 1219 IPR024435 -
Vivi5g02763 1227 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02763 Vivi-Chr5 114095174 114112074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02763 414 719 MAP Kinase Kinase Kinase AT1G63700 25.949 7.02e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Vivi5g02763 Pkinase 4.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02763 K16196 - gmx:100797996 1941.01