Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02684 ATGGACACAGAAAGATCAATAGAAGACCAATTCTCCAAGCTGCACCCTTCTTTACCACAAAACACAAGAATCGGAATAATCGGTGCTGGTCCAAGTGGCTTATCAGCTGCTTATGCATTAGCCAGGCTTGGTTATAAGAATGTTACAGTTATGGAGAAACATCACACAGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGATTTGGGAGGACAAGTTCTAGCTGCAAGCAGTGCTCCAGTTATCTTTCACTTGGCGAAAGAGACAGGCTCTGAATTAGAAGAAATGGATTCGCACAAGCTTGCTGTTGTTGATCCTTCATCAGGAGAATATCTTGATATTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTTACGTTGGAAATACAAGAAAAAGTGAAGAATTGTGGTCGTATCGGGGTTCACGCTGTTAGCGACATTGCTTCAGACTTAACTCCAGAGTATCTAGAGTGTCATGGACTCAAATCCGTTCCTAAATCTGTAGCTTATGGTTACACTGCTTCAGGATATGGGTTTGTTCAAGACATGCCTTATGCATACCTTCATGAATTTACTCGAACGTCAATGGCCGGAAAAATTCGACGATTTAAAGGTGGATATACAAGTCTTTGGTGGAAGATTGCTGAATCACTTCCTTTTAGAGTTCTATGTAACACTGAAGTGTTGTCAATCAAACGGAACTCAGACAGGGTCGTGGTTCGTATCAAGAACTTAAATGTAGCTGAATCATTGGAATTCGATAAGATCATAATTTCTGGTTCGTTTCCATTCAATTATGGAAGAATTTACCGATCGCCTTCTACTTTCATAGAATGCGGAAAAGAAGTAATGGATGCAAGTGATCTTGAAAAGGATTTATTCAGCAAAGTCGAGACAAATGATTACTACACCACGGTTTTGAAGATCAAAGGGCTGGAACATTTTCCCATTGGATTTTATTATTTTAGTAAATATATGGAAGATCCCAGCACAATTGGAAACCCAGTTGCAATGCAGAAATTTTATGATAACAGTAATATATTCTTGTTCTGGTCCTACGGAAACTCAGTTGATATTAAGGGACCAACTGTCAAGGAGCTTGCAATAAAGACAGTAGAAGCCATGGGAGGGGAAGTTGAGAGTTTCATTCTTCAACGCAACTTCAAATATTTTCCTCATGTTAGCAGCCAAGATATGAAAGATGGATATTATGAAAAGTTGGAATCAGAGCTTCAAGGATCAAATGATACTTATTATGTTGGTGGTCTTATGGCATTTGAGCTAACAGAAAGGAACTCATCTTATGCCATGGCTCTAATTTGCAAGAACTTTGCCAACAGAAATGATTTGCCGACATTTCCTTACACTAAGAATTTGTTTCCCTTGCAAACTGAGCTACAAAAGAAGAACCCTAAAGAATTAGATGAATTGCCAGAAGTGAAATTTCCGAATTTGCCTACTTTGAATAGCTACTTAAAGTACTGGGGGACTCATCCGATTACTCAAAATAAGACTCTTTATACATGGATTAACGAAGAAGGGAATCCAGTGAGTCGCAGGACCTATGGAGAACAGCATTTTTATTCTTCTTGTGTTGCTCATAAGCTCTTGACAAGCCAAAAGCCGGTTATCAAGCCCGGTGACCGAGTTCTCCTTGTCTACGTCCCCGGTTTAGATTTTATAGATGCGTTCTTTGGATGCCTAAGAGCTAAAGTCTTGCCAGTTCCAATTATTCCCCCGGATCCCATGCAAAGAAGTGGACAGGCACTAATGAAAATTGAAAACATTGCCAAGTCATGTGGCATTGTTGCGATTTTGTCAACTTTAGCTTATCACTCAGCTGTCCGAGCAGGTTCTTTGAAAAATTTGATTTCACTAACACGGAAAAATGGGAAGTCATCCAGCCGTTGGCCAAATCTTCCGTGGTTGCATACTGATACCTGGGTCAAGAACTCTAAGAGCATTGTTTTGGAGCATCTTGATGATCAGAACGAACCACAGCCTGACGATACATGTTTCTTGCAATTTACCTCGGGATCAACTGGTGATGCTAAAGGAGTCATGATCTCTCATGGAGGGCTAATTCATAATGTGAAGTTGATGCAAAGTAGATACAAAAGTACCTCAAGGACTAAACTGGTAAGTTGGCTTCCTCAGTATCATGATATGGGGCTTATTGGAGGACTTTTTACCTCTCTTGTTAGTGGTGGATCTGCGATTTTATTTTCACCTATGACATTTATCAAGAAGCCAATGTTATGGCTTGAAATCATCAGCAAGTATCAAGCAACTCATAGTGCCGGCCCTAACTTTGCCTTCGAGTTACTAATCCGAAGATTAGAGTCTGACAAGGATAAGATTCGGAATTTAGACCTTTCATCTTTGGTTTTTCTTATGGTTGCTGCTGAACCAGTGAGACAGAAGACCTTGAAAAGATTCATTGAGTTAACAACTCCTTTTGGCTTATCTCAAAAGGTGATGGCTCCTGGATACGGCTTGGCAGAAAATTGTGTGTTTGTAAGTTGTGCATTTGGAGAAGGTAAGCCTATTATTGTTGATTGGCAGGGAAGAGTTTGTTGTGGGTATATTCGTCCGGAAGATAAAGATATCGACATTAGAATTGTTGACCCAGACACTTGCGAAGAGTTTCACGAAGACGGGACGGAGGGAGAAGTCTGGATTAGTAGTCCAAGTGCAGGAGTAGGATACTGGGGAAGGGAAGAATTGAGTCAGAAAACTTTCAGGAATGAACTTACAAATCATCCCGGACGTAAATACACAAGAACCGGAGACTTGGGACGAATAATAGATCAGAAGCTATTCATCACTGGAAGAATCAAGGATCTTATCATTGTTGCAGGGAGAAACATCTACTCGTCTGACGTGGAAAAGACAGTTGAGACTTCATCTGAGTTTCTTCGTCCTGGTTGCTGTGCTGTCATAGGTGTCCCTGAGGAAATTCTATCAGCAAAAGGGATTTCCATTCCAGATGGCTCTGATCAGGTTGCGTTGGTTGTGATTGCAGAAGTAAGGGACGGTAAGCCAGTTAGCAAGGATGTGATTGACATCATTAAGATGCGTGTGGCAGAAGAACATGGAGTCAGTCTTGCTTCTGTCAAGTTGATCAAGCCTAGAACCATCAGCAAAACTACATCGGGAAAGATCAAGAGATTTGAATGTCTCAAACAATTTACAGACGAGACACTGCACTTGGTACCTCTACGTACGAAACCTATGATGACAAAGAAATCTAAGGTATGGCCATTTACTGCATCAACCTGCAGAGAAGAAAAACCATTCCAGCTCCAGCTAGTAAGAAGTTCACCTGCAGATAGTAAGAGGATCAATAAAAGCGACATTGTAGAGTTTCTGAAAGTTCTTATTTCTGAGCAGACTGGAGTACTAATCAACAATGTCTCAGTCACTGACAACCTCACATCCTACGGAATTGACTCAATTGGTGTTGTTAAAGCAACTCAAAAACTCTCCGATTTCCTTGGAACACCAATTGCAGCTATAGATGTTTTCACTGCATCATGCATCCTTGAATTGGCTAGCTTCTCAGAGGATCTTCTGTCAAAGACTCAGCCTCAGATAGTGAGAAGTATACCTGTCACTACTAAAAGGATCAATAAGAACAACATCGTAGAGTTTTTGAAAGTGCTTATTTCTGAGCAGACTGGAGTATCAATCGACAACATCTCAGTCACAGACAACCTGACATCCTATGGAATCGACTCAATTGGTGTGGTTAAAGCAACTCAAAAACTCTCAGATTTTCTTGGAACACCAGTTGCAGCAATAGATGTTTTCACTGCATCCTGCATTCAAGAATTGGCTAACTTCTCTGAAGATCTTTTATCAAAGACTCAGACTCAGCTTTCAAATAATCCATCCGATGTTCCAGAAGCGGAAATTGATTCAACTGAATCAGTTGTGGAGGTATCCAAGTCTCGCCAGTTGGGTATCCGTTTACTTCAATTCCTGGCTCTTATTTATATCTCAATCATGCTGGCCTCTCCTGCCTATCTATCCATAACTGCTTTTACAAATTCCAGCCTATGTGCCAATAAATCAGTAGCTGGAGTTTCTTGGTTAAATTACATAATTTCGCTGGTTTTTGCACCTCTTGCTTGGATTCTTTGCATTGCTTCTACTTGCATTTGCATTTCAGTGTTTGGAAGTTCTTTATTGGGGCTAAACTATGAACATACTTCTGACATCTCCATTTATTCAATGGATTTTGTCAAGTGGTGGACACTATATAAGGCTCAAGAAATTTCCTCTAAAGTTTTGGCAACACACCTCAGAGGAACAGTGTTTCTGAACTACTGGTTTGAGATGTTGGGTGCAAGAATTGGATCATCAGTTCTTCTTGATACAGTTGACATCACAGACCCGGCTCTGGTGTCAATCGGAGACGAAGCTGTCGTTGCGGAAGGGGTTTTGGTTCAAAGCCATGAGGTAAAGAAAGGAGTTCTAAGTCTCCATCCCGTTAGGATTGGAAACTATTCCTCTATTGGACCTTATGCTGTTATTCAAAAAGGAAGTGTTGTTGGAGAAAGTGTTGAAGTAAAGGCTTTGCAAAAGGTTGGAGGAGGTGAACATGTGCTAAAGCCAAATAACCTTGATAATATTGATAAGAATGCAGATCTTCCTGTTATTAACAGCAAAACTCAATATGATACCATCTACCACTTTATGGGGATCTATCTTGTTGGCTTTCTCTCCTCACTTGCTGCAGCCATTGCATATTTCTTATATATCAAATTCTCCAAACATCCTCCATCACTCCAACACTTTTCATTTGTTTGTATATGTGGCGCTTTTCACTGGATACCGTATACTGTCATTGCATATGCTTCAATGTTCTATGATGTCCCATCAAACCCCATCACCTTTGCCATTTCATTTACCGGCGCTTACTTGCTTCATAGTCTCATACTCATCACTCTCACCGCTGTTCTTACACGTCTCCTCATACATAACCCAAAGCAAAACGAATTCAAAACCTGGCTTCAATGTCGATTAAACATATCCTGCCACCTTAGATGTGCTAAGCTTCTCTCAGGAACAGAAGCCTTCTGCGTATATTTACGCCTTATGGGGGCGAAAATTGGCAAGCATTGTTCCATTAGAGCCATCAACCCAGTTTCAAATCCAGAGTTAATGTCAATCGGTGACGGCGTCCATCTCGGAGATTTTAGCAAAATAATTACAGGGTTTCATTCTTCCAATGGATACCTTAGTGGAAAAATTGAGGTTCAAGATAACTCGGTTATCGGAAGTCAAAGCTTAATTCTCCCTGGTTCTCTCATCCAAAAGAATGTGATCCTTGGTGCACTTTCAGTAGCTCCAATGAATTCTATACTCCAAGAGGGTGGTTTATATATCGGTTCACAATCCCATACAGCTAACTTAACTTCACCATTGCACAAACAAGACTCACAAAAAGTAACCTTCACATTGACAAGGAAATGGTATCAAACCTTCTCATCACTTTTCATTCAGCCATTTTTACAAACAGTTTCGCCTCATATTTTATTAGGATTAGCAATTTATGCTCCTTTGAACTTGATTTTTCACCTAAAGAATACCAAAAAAGTTCCAATCTTTTGGCTACTTCCTTTGATATGGATTCTCTCAGGTACTATAGCTGCATTAACATGTGCTATAGCCAAATGGGTACTTATAGGAAGGAAGAAAAAGGGTGAAAAAGTGTCTATATGGAGTAAAAGCATAATCTTGGATACTACATGGCAAGCTATAAGAACAATAACAGGTGATTATTTCATGGAAATAACATGTGGGTCATTAATGTTTGTTACATGGATGAAGATGATGGGTGTTGAAGTAGACATGGATGATGGTGATGTATATGTTGATAGCATGGGAGCACTGTTGAACCCTGAGATGGTTAAGATAGAGAGAGGTGGTTGTGTGGGAAAAGAAGCATTGTTGTTTGGACATATATATGAAGGTGATGAAGGAGGGATGGTGAAGTTTGGAGAGATTAAGGTTGGTGAAGATGGGTTTGTTGGGAGTAGAGCTATGGTTATGCCTGGTGTGAGGTTGGAGAATGGGGCTAATGTTGGTGCTTTGTCACTTGCAATGAAAGGAGAGGTTGTTAGGTGA 6150 0.4026 MDTERSIEDQFSKLHPSLPQNTRIGIIGAGPSGLSAAYALARLGYKNVTVMEKHHTVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSELEEMDSHKLAVVDPSSGEYLDIKVADDYVSVMSLTLEIQEKVKNCGRIGVHAVSDIASDLTPEYLECHGLKSVPKSVAYGYTASGYGFVQDMPYAYLHEFTRTSMAGKIRRFKGGYTSLWWKIAESLPFRVLCNTEVLSIKRNSDRVVVRIKNLNVAESLEFDKIIISGSFPFNYGRIYRSPSTFIECGKEVMDASDLEKDLFSKVETNDYYTTVLKIKGLEHFPIGFYYFSKYMEDPSTIGNPVAMQKFYDNSNIFLFWSYGNSVDIKGPTVKELAIKTVEAMGGEVESFILQRNFKYFPHVSSQDMKDGYYEKLESELQGSNDTYYVGGLMAFELTERNSSYAMALICKNFANRNDLPTFPYTKNLFPLQTELQKKNPKELDELPEVKFPNLPTLNSYLKYWGTHPITQNKTLYTWINEEGNPVSRRTYGEQHFYSSCVAHKLLTSQKPVIKPGDRVLLVYVPGLDFIDAFFGCLRAKVLPVPIIPPDPMQRSGQALMKIENIAKSCGIVAILSTLAYHSAVRAGSLKNLISLTRKNGKSSSRWPNLPWLHTDTWVKNSKSIVLEHLDDQNEPQPDDTCFLQFTSGSTGDAKGVMISHGGLIHNVKLMQSRYKSTSRTKLVSWLPQYHDMGLIGGLFTSLVSGGSAILFSPMTFIKKPMLWLEIISKYQATHSAGPNFAFELLIRRLESDKDKIRNLDLSSLVFLMVAAEPVRQKTLKRFIELTTPFGLSQKVMAPGYGLAENCVFVSCAFGEGKPIIVDWQGRVCCGYIRPEDKDIDIRIVDPDTCEEFHEDGTEGEVWISSPSAGVGYWGREELSQKTFRNELTNHPGRKYTRTGDLGRIIDQKLFITGRIKDLIIVAGRNIYSSDVEKTVETSSEFLRPGCCAVIGVPEEILSAKGISIPDGSDQVALVVIAEVRDGKPVSKDVIDIIKMRVAEEHGVSLASVKLIKPRTISKTTSGKIKRFECLKQFTDETLHLVPLRTKPMMTKKSKVWPFTASTCREEKPFQLQLVRSSPADSKRINKSDIVEFLKVLISEQTGVLINNVSVTDNLTSYGIDSIGVVKATQKLSDFLGTPIAAIDVFTASCILELASFSEDLLSKTQPQIVRSIPVTTKRINKNNIVEFLKVLISEQTGVSIDNISVTDNLTSYGIDSIGVVKATQKLSDFLGTPVAAIDVFTASCIQELANFSEDLLSKTQTQLSNNPSDVPEAEIDSTESVVEVSKSRQLGIRLLQFLALIYISIMLASPAYLSITAFTNSSLCANKSVAGVSWLNYIISLVFAPLAWILCIASTCICISVFGSSLLGLNYEHTSDISIYSMDFVKWWTLYKAQEISSKVLATHLRGTVFLNYWFEMLGARIGSSVLLDTVDITDPALVSIGDEAVVAEGVLVQSHEVKKGVLSLHPVRIGNYSSIGPYAVIQKGSVVGESVEVKALQKVGGGEHVLKPNNLDNIDKNADLPVINSKTQYDTIYHFMGIYLVGFLSSLAAAIAYFLYIKFSKHPPSLQHFSFVCICGAFHWIPYTVIAYASMFYDVPSNPITFAISFTGAYLLHSLILITLTAVLTRLLIHNPKQNEFKTWLQCRLNISCHLRCAKLLSGTEAFCVYLRLMGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSKIITGFHSSNGYLSGKIEVQDNSVIGSQSLILPGSLIQKNVILGALSVAPMNSILQEGGLYIGSQSHTANLTSPLHKQDSQKVTFTLTRKWYQTFSSLFIQPFLQTVSPHILLGLAIYAPLNLIFHLKNTKKVPIFWLLPLIWILSGTIAALTCAIAKWVLIGRKKKGEKVSIWSKSIILDTTWQAIRTITGDYFMEITCGSLMFVTWMKMMGVEVDMDDGDVYVDSMGALLNPEMVKIERGGCVGKEALLFGHIYEGDEGGMVKFGEIKVGEDGFVGSRAMVMPGVRLENGANVGALSLAMKGEVVR 2049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02684 2049 Gene3D - 478 951 IPR042099 -
Vivi5g02684 2049 CDD FAAL 508 1071 IPR040097 GO:0008610
Vivi5g02684 2049 ProSiteProfiles Carrier protein (CP) domain profile. 1218 1292 IPR009081 -
Vivi5g02684 2049 Gene3D - 1113 1195 IPR036736 -
Vivi5g02684 2049 Gene3D - 1209 1290 IPR036736 -
Vivi5g02684 2049 SMART Phosphopantetheine attachment site 1126 1197 IPR020806 GO:0031177
Vivi5g02684 2049 SMART Phosphopantetheine attachment site 1221 1292 IPR020806 GO:0031177
Vivi5g02684 2049 ProSitePatterns Phosphopantetheine attachment site. 1247 1262 IPR006162 -
Vivi5g02684 2049 Gene3D - 302 395 - -
Vivi5g02684 2049 SUPERFAMILY Trimeric LpxA-like enzymes 1442 1539 IPR011004 -
Vivi5g02684 2049 Gene3D Hexapeptide repeat proteins 1698 1833 - -
Vivi5g02684 2049 Pfam AMP-binding enzyme 519 957 IPR000873 -
Vivi5g02684 2049 Pfam Flavin containing amine oxidoreductase 32 266 IPR002937 GO:0016491
Vivi5g02684 2049 SUPERFAMILY ACP-like 1121 1208 IPR036736 -
Vivi5g02684 2049 ProSitePatterns Phosphopantetheine attachment site. 1152 1167 IPR006162 -
Vivi5g02684 2049 SUPERFAMILY ACP-like 1216 1296 IPR036736 -
Vivi5g02684 2049 ProSiteProfiles Carrier protein (CP) domain profile. 1123 1197 IPR009081 -
Vivi5g02684 2049 Gene3D - 23 445 IPR036188 -
Vivi5g02684 2049 SUPERFAMILY FAD/NAD(P)-binding domain 20 273 IPR036188 -
Vivi5g02684 2049 SUPERFAMILY Trimeric LpxA-like enzymes 1705 1796 IPR011004 -
Vivi5g02684 2049 ProSitePatterns Putative AMP-binding domain signature. 679 690 IPR020845 -
Vivi5g02684 2049 SUPERFAMILY Trimeric LpxA-like enzymes 1857 2045 IPR011004 -
Vivi5g02684 2049 Gene3D Hexapeptide repeat proteins 1948 2045 - -
Vivi5g02684 2049 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 132 1224 - -
Vivi5g02684 2049 Gene3D - 952 1080 IPR045851 -
Vivi5g02684 2049 Pfam Phosphopantetheine attachment site 1129 1191 IPR009081 -
Vivi5g02684 2049 Pfam Phosphopantetheine attachment site 1224 1287 IPR009081 -
Vivi5g02684 2049 PRINTS Adrenodoxin reductase family signature 23 45 - -
Vivi5g02684 2049 PRINTS Adrenodoxin reductase family signature 47 60 - -
Vivi5g02684 2049 Gene3D Hexapeptide repeat proteins 1453 1547 - -
Vivi5g02684 2049 Gene3D - 94 202 - -
Vivi5g02684 2049 SUPERFAMILY Acetyl-CoA synthetase-like 493 1073 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02684 Vivi-Chr5 112860359 112867486 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02684 674 1072 Monolignol Biosynthesis Gene Families AT1G20480 25.686 2.30e-21 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02684 - - tpra:123914735 3628.18