Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02669 ATGGATTCAGCTCCACCATTGTTGGAGCTAGACCTTGACAACCTTAAAGCCCTCAAAATCCTAGGCAAAGGTGCCATGGGCACTGTCTTCCTCGTCCGCCACCCCACAATCACAACCACCAACACCACCAACAGCAACAACAACAACAACCTCTTCGCTCTCAAAGTCGTGGACAAAACCTCCATGCATGCAAAACTCGACGCAGAACGCCGTGCCCGTTGGGAAATCCAGGTTCTCTCAGCGCTCTCCCACCCTTTTCTCCCTTCCATTCTCGGCATATATGAATCGCCACAGTTTCTTGCATGGGCCTTACCTTATTGTCCAGGGGGTGATCTCAATGTCCTCCGTTACCACCAAAACGACCGCGTTTTCTCTCCTACCGTTATTCGATTCTACCTTGCTGAAATAATATGCGCTCTCGACCACCTTCATTCCATGGGCATCGCTTACCGTGACTTAAAACCCGAAAATGTCCTTATCCAACGCTCCGGGCACGTCACCCTCACCGATTTTGACCTCTCCCGAAAACTCAAACACAAAACCGTTAACAACATTGTTTCTGCAATGTCTTTGCCTGACAAAAAGGCTCAAGAAGCTTCCAGAAAACACCGACGCAACTTCTCTCGCTGGATCCAGCTTCTTCCTAAAGAATCCTCTCAATATTATCAGAACGGTTTGAGTTTAAGTTTGAGTTTGAAGAAGACAATGTCAGCAAGAGTTAGCCCGGTGAGTCGACGGAAACAAAGCTTCTCAAACGGCGAACGGTCCAACTCGTTCGTTGGGACCGAGGAATATGTCTCGCCGGAGGTTGTTCATGGTGATGGACACGAGTTTGCTGTGGATTGGTGGGCGCTTGGGATTCTAACATACGAGATGCTATATGGCAGGACGCCTTTCAAGGGAAAGAATCGGAAGGAAACGTTTAGGAATGTGCTTACGAAGTCGCCGGAGTTCGTTGGGAAAAGGACGGAGTTGACGAATTTGATAGAGAGGTTGTTAGAGAAGGATCCTATGAAGAGATTGGGTTATTCGCGTGGTGCTATTGAGGTCAAACAACATGGGTTCTTTAGAGGGGTTAATTGGGAAATGTTGACGAAGGTGGTGCGTCCTCCATTCATTCCGGGTAGAGATGACATTAACGGAGAACTACCATCGGGGAAATTTTCCGATGGAAATGGCAGTGTGAATATAAAAGATTATTTTCAACGGTTGAAATCATCGTCGCTAATGCCTCACGCGCCTTTGCCGTTACCGTCGCCGCCTTGTTATAGGTTTAGAAAAAATGTTTCGCTAACGGCATTCTAA 1305 0.4759 MDSAPPLLELDLDNLKALKILGKGAMGTVFLVRHPTITTTNTTNSNNNNNLFALKVVDKTSMHAKLDAERRARWEIQVLSALSHPFLPSILGIYESPQFLAWALPYCPGGDLNVLRYHQNDRVFSPTVIRFYLAEIICALDHLHSMGIAYRDLKPENVLIQRSGHVTLTDFDLSRKLKHKTVNNIVSAMSLPDKKAQEASRKHRRNFSRWIQLLPKESSQYYQNGLSLSLSLKKTMSARVSPVSRRKQSFSNGERSNSFVGTEEYVSPEVVHGDGHEFAVDWWALGILTYEMLYGRTPFKGKNRKETFRNVLTKSPEFVGKRTELTNLIERLLEKDPMKRLGYSRGAIEVKQHGFFRGVNWEMLTKVVRPPFIPGRDDINGELPSGKFSDGNGSVNIKDYFQRLKSSSLMPHAPLPLPSPPCYRFRKNVSLTAF 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02669 434 Gene3D Transferase(Phosphotransferase) domain 1 250 375 - -
Vivi5g02669 434 SMART serkin_6 15 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g02669 434 Gene3D Transferase(Phosphotransferase) domain 1 111 183 - -
Vivi5g02669 434 ProSiteProfiles Protein kinase domain profile. 15 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g02669 434 FunFam Serine/threonine-protein kinase OXI1 254 375 - -
Vivi5g02669 434 PANTHER FLIPPASE KINASE 1-RELATED 10 376 - -
Vivi5g02669 434 Pfam Protein kinase domain 250 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g02669 434 Pfam Protein kinase domain 17 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g02669 434 SUPERFAMILY Protein kinase-like (PK-like) 12 388 IPR011009 -
Vivi5g02669 434 Gene3D Phosphorylase Kinase; domain 1 15 110 - -
Vivi5g02669 434 FunFam Serine/threonine-protein kinase OXI1 111 179 - -
Vivi5g02669 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02669 Vivi-Chr5 112551761 112553307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02669 10 434 AGC Kinase Gene Family AT3G20830 57.077 1.22e-155 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi5g02669 Pkinase 4.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02669 - - gmx:100785281 582.408