Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02662 ATGGAACTCGAAAAGGCTCATATCTTGGAAGCAAGACCAGTAGAGGAAATTGAGATACCAATTGTTTCTGACTCAGACAGACTTGATCTTCTGACAAAGATGTCGTCCTCTTACAACAATTCTGTGTGTCGTTTTTCCAGAAAGGAAAACAGTGCTGGTGCGTCGAATGACTCGGCGAAGAAACTTTCTTTACTGATAGTTTTCTATGCTGTTGTTATGGTTGTTGAGCTTATTGGGGGAATGAAAGCTCAGAGCTTGTCTGTTATCAGTGATGCTGCACATTTGCTTTCTGATATTGCTGGATTTGCTATCTCTCTGTTTGCAGTGTGGGCTTCGGGTTGGGAGGCGACTCCGAGTCAATCTTTCGGATATAATCGTCTTGAGGTTTTGGGGGCTCTTTTATCTGTTCAGTTAATTTGGTTCATTTCTGGTTTTTTGATATATGAAGCTGTTGGTAGAATTGTTTATAGGAATGCTAGTGTGAATGGAAAGCTCATGTTTGCAATTGCAACATTTGGTTTTGTTCTTAACTGTATTATGGTTTTATGGCTTGGTCATGATCATAGTCATCATCATGGATTTGGACATTCACATGGTCACGGTCATGACCATGATCATCACAATCATGGTCATGAGCATGATCATGACCATTCTCATGACCATCATCATCATGATCGTAGTCATAGTCATCATCAATGCGGTGGAGACGCGGATCATGATCATGGGATGGAGGAACTGTCTAAAATAACCGATGAGGAGAATCTTTCAATGATTTCAAATGGTAAGACGAAAACGAATGTTTTGAACATTAATCTTCAAGGGGCTTATTTACATGTGATGACGGATATGATTCAATCTATGGGAGTGATGATTGCCGGAGGAATAATATGGGCTAAACCCGAATGGTTTATAGTTGATCTTCTATGTACTCTCGTTTTCTCTATTTTATCCTTAAGTACTACTCTGACAATGCTTAAGAGCATTTTCGGCATTCTGATGGAGAGGACGCCGAGTGAAATTAATATCATTCAGCTGGAAAATGGTCTTAGAAGTATCAAGGGAGTGCAGGAGGTTCATGATTTGCATGTTTGGGCTATAACAGTTGGAAAACTTTTTCTATCTTGCCATGTAGTAGCTGAACCCGGCATCAGTTCCATTGATTTGCTTGATAGGATTAAACATTATTGTGAAAACACTTATCAAATACAACATGTAACCATTCAAATTGAATAG 1233 0.3925 MELEKAHILEARPVEEIEIPIVSDSDRLDLLTKMSSSYNNSVCRFSRKENSAGASNDSAKKLSLLIVFYAVVMVVELIGGMKAQSLSVISDAAHLLSDIAGFAISLFAVWASGWEATPSQSFGYNRLEVLGALLSVQLIWFISGFLIYEAVGRIVYRNASVNGKLMFAIATFGFVLNCIMVLWLGHDHSHHHGFGHSHGHGHDHDHHNHGHEHDHDHSHDHHHHDRSHSHHQCGGDADHDHGMEELSKITDEENLSMISNGKTKTNVLNINLQGAYLHVMTDMIQSMGVMIAGGIIWAKPEWFIVDLLCTLVFSILSLSTTLTMLKSIFGILMERTPSEINIIQLENGLRSIKGVQEVHDLHVWAITVGKLFLSCHVVAEPGISSIDLLDRIKHYCENTYQIQHVTIQIE 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02662 410 Pfam Cation efflux family 64 333 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vivi5g02662 410 Gene3D Cation efflux protein transmembrane domain 58 332 IPR027469 -
Vivi5g02662 410 MobiDBLite consensus disorder prediction 194 242 - -
Vivi5g02662 410 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 39 410 - -
Vivi5g02662 410 NCBIfam cation diffusion facilitator family transporter 60 410 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vivi5g02662 410 SUPERFAMILY Cation efflux protein transmembrane domain-like 60 334 IPR027469 -
Vivi5g02662 410 MobiDBLite consensus disorder prediction 198 221 - -
Vivi5g02662 410 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 338 410 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02662 Vivi-Chr5 112020706 112022842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02662 31 410 Inorganic Solute Cotransporters AT3G58810 45.714 1.16e-98 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02662 K14689 - gmx:100789520 515.383