Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02653 ATGGATGGTGGACACATGCACGGCGGCATGGATGGTATGAACCAAAACTCATCATCATCATCATCAAATGGAACCATGACGATGATGGGTCATAAGATGCACGGCATGATGCACATGACATTCTACTGGGGAAAAGACGCGTTGATTCTCTTCAACGACTGGCCTGCTGGTGATACCGGTATGTATGTACTGGCCTTGATAATTGTTTTCGTCATGTCGGTTCTCATCGAGTTACTCTCACGAACCCGGTTTATTAAACCCGGTTCGAACCCTGTCACTGCCGGTCTGGTTCAGACGCTGTTGCATGTGCTTAGAGTTGGTCTGGCTTATTTGGTTATGTTGGCTCTTATGTCTTTCAATGGAGGTGTGTTCTTGGTTGCTGTGCTTGGTCATGCTCTTGGGTTTCTCTTGTCTAGCAGTGCTTTCAGAAAACAACAAAACCATGATGAGCCTTATGATCTTCCTCCTATATCTTGTTAA 480 0.4562 MDGGHMHGGMDGMNQNSSSSSSNGTMTMMGHKMHGMMHMTFYWGKDALILFNDWPAGDTGMYVLALIIVFVMSVLIELLSRTRFIKPGSNPVTAGLVQTLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGHALGFLLSSSAFRKQQNHDEPYDLPPISC 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02653 159 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 28 149 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vivi5g02653 159 MobiDBLite consensus disorder prediction 1 24 - -
Vivi5g02653 159 Pfam Ctr copper transporter family 93 137 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vivi5g02653 159 Pfam Ctr copper transporter family 39 82 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02653 Vivi-Chr5 111897909 111898619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02653 40 159 Inorganic Solute Cotransporters AT5G59030 48.387 1.42e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02653 K14686 - gmx:100306175 207.608