Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02646 ATGGCTTCCATACCTCTCACCACCGCCACCACTCCAACCACCCTCCCATACCTCCGCCTCCGTTCATCTCCGCCACTTCGCCGACTCCAAATCAACAACACTTTCAAATCTCTCAAATCAGTTCATCACTCTTCCATTTCGTCTTTCTCACCCCTCCCACTCTCTAACCTCATCTCGAAACGCCACACTCTCACTGTTAAGGCTTCATCAGCTTCCGTCACACCAGCTCCAGCTCCGGCTCCGGCTCCGGCTCAGCCATGGCAAGGAGCCGCGATAAAACCTCTCTTAGCATCTATAGCTACCGGAGTTATACTCTGGTTCGTTCCCACTCCCGAAGGTGTATCCCGAAACGCGTGGCAACTACTCGCGATTTTCTTAGGAACTATCGTCGGAATCATCACACAGCCGTTACCTCTCGGTGCCGTTGCCATTTTGGGATTAGGAGTTTCGGTTCTCACCAAAACCCTACCCTTCGTTGCTGCATTCTCCGGTTTCGGTGATCCAATCCCATGGCTGATTTGTCTTGCGTTCTTCTTTGCTAAGGGTTTTATCAAAACCGGACTAGGTAACCGTGTCGCTTATCAGTTCGTTTCGCTTTTCGGTAGTTCTTCGTTAGGGTTAGGTTATAGTTTGGTTTTCAGTGAAGCTTTATTGGCTCCGGCGATTCCTTCGGTTTCGGCGAGGGCTGGTGGAATTTTTCTTCCATTGGTTAAGTCTCTCTGTGTTGCTTGTGGAAGTAATGTTGGTGATGGGACGGAGAACAAGCTTGGGTCGTGGTTGATGCTTACTTGTTTTCAGACTTCGTGTATTTCGTCGGCGATGTTTTTGACTGCAATGGCGGCGAATCCGTTATGTGCTACTCTTACTTTGAATTCGATTAACCAGACAATTGGGTGGTTGGATTGGGCTAAAGCTGCTATTGTGCCGGGTTTGGTGTCGTTGGTTTTGGTGCCGTTGATTTTGTATATTATATATCCTCCTACCATGAAATCTAGTCCTGATGCACCCAAGCTTGCTAGGGAAAGGTTGGCGAAAATGGGGCCAATGTCGGGCAATGAGAAAATCATGACTGCTACTCTATTTCTTACGGTGGGACTTTGGGTTTTTGGAGGGCTTCTTAATATAGATGCCGTAACTGCTGCTATTCTTGGATTAGCTGTGCTCCTCATCACAGGGGTTGTAACATGGAAAGAGTGCTTAGCCGAGGGTGTTGCCTGGGATACTCTCACGTGGTTTGCTGCCCTCATTGCAATGGCCGGGTATTTGAACAAATATGGTCTCATCTCTTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGATTGGGTCTGTCGTGGCAACTATCTTTTGGTATTCTGGTTCTCCTATATTTCTACTCCCATTACTTCTTTGCCAGTGGAGCTGCTCATATTGGTGCCATGTTTACTGCATTTTTGTCTGTTGCTACTGCTCTGGGGACTCCACCATTCTTCGGAGCCATGGTGTTGTCTTTCCTCTCCAACCTTATGGGTGGCCTTACTCATTATGGGATTGGGTCAGCTCCAGTGTTTTTCGGTGCCAACTATGTCCCACTTGCCCAATGGTGGGGTTACGGCTTTGTTATTAGTATTGTTAACATTATAATCTGGCTTGGACTCGGTTCTATTTGGTGGAAAGCCATTGGCTTGTGGTAA 1674 0.4773 MASIPLTTATTPTTLPYLRLRSSPPLRRLQINNTFKSLKSVHHSSISSFSPLPLSNLISKRHTLTVKASSASVTPAPAPAPAPAQPWQGAAIKPLLASIATGVILWFVPTPEGVSRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLPFVAAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTENKLGSWLMLTCFQTSCISSAMFLTAMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLVSLVLVPLILYIIYPPTMKSSPDAPKLARERLAKMGPMSGNEKIMTATLFLTVGLWVFGGLLNIDAVTAAILGLAVLLITGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAQWWGYGFVISIVNIIIWLGLGSIWWKAIGLW 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02646 557 Pfam Sodium:sulfate symporter transmembrane region 94 557 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vivi5g02646 557 NCBIfam DASS family sodium-coupled anion symporter 109 551 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vivi5g02646 557 CDD ArsB_NhaD_permease 129 551 - -
Vivi5g02646 557 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 63 557 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02646 Vivi-Chr5 111760377 111764034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02646 24 556 Antiporters AT5G12860 80.819 0.0 839