Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02639 ATGGGAAGTGTGGAAAGAGAGATGAAAAATATGAGAGAATATTTTAGGAGTGGAGTAACAAAGGAAGCATCTTGGAGAGAATCACAACTAAAAGGGTTGCGTCGTTTTCTTATAGAAAAAGAGAGTGATATCTTCAAAGCTCTCATGCAAGATTTAGGGAAACATAGAGTTGAAGCTTTTAGAGATGAGATAGGAACATTGGTGAAGACTTTAAATCTAGCAATAAAGTGTCTGAAAGATTGGATGTCAAGCAAGAATGCTAACCTACCAGCATTAGCATTGCTAACAAGTGCAGAAATTGTTCATGAGCCTCTTGGTCTTGTCCTCATTATTTCTTCTTGGAATTTCCCATTTGGATTGTCTTTGGAGCCATTGATAGGAGCAATAGCTGCTGGAAACACAGCAGTGTTGAAACCTTCCGAGTTGTCTGCATCATGTTCCTCTTTACTTGCTTCTGGTATTGCTACTTACTTAGATAATAAAGCCATTAAAGTTATTGAAGGGGGACCAGAGGAATCCCAGCTGTTATTACAACAAAAATGGGACAAAATCTTCTTTACAGGTAGTGCACGCGTGGGGCGCATTGTGATGTCTGCTGCTGCGACGCACCTGACCCCTGTAACGCTGGAGCTGGGCGGAAAATGCCCTGCAGTTGTGGACTCACTTTCATCTTCTTGGGACTTAGAGGTTACTGTGAAGAGGATTATTGTGGGAAAATATGGGACTTGTGCTGGTCAAGCATGCATAGCAATTGATTATGTTATTGTGGAAAAGAGTTACTGTTCAAAACTGGTGGAATTGATGAAGGTGTGGATCAAGAAAATGTTTGGAGATAACCCAAAACATTCCAATACTATAGCAAGGATAGTTAATAAACAACAGTTAGCTAGATTGAAGAAACTTCTTATTGATCCAAAAGTTAAAGAATCTGTGGTTTATGGTGGCTCAGTGGATGAAGAAAACTTATTTATTGAGCCAACAATCTTGGTGGATCCACCACTTGATGCAGCAATAATGGTAGATGAAGTTTTTGGCCCATTACTTCCAATTATCACTGTGGAGAAAATTGAGGACAGTATTGAATTCATAAGCTCTAGGCCTAAACCTCTTGCCCTTTATGTTTTCACCAAAAACCAAACACTTCAGAACAGAATGATATCCGAAACATCGTCTGGCAGTGTTACTTTCAATGATGCAATTCTACAATATGCAGCAGATAGTTTACCATTTGGAGGAGTAGGTGCGAGTGGATTCGGCATGTACCATGGAAAATTCTCCTTTGATACATTCAGTCACCAGAAAGCTATTGTTAGAAGAAGTTTCTTAACTGATTTTTGGTATAGGTATCCACCTTGGACAGCAAACAAGTTTCAACTGCTTGAAGTTTCTTACAATTATGATTATCTTGGATTGATCCTTGTTATTCTTGGGTTAAAGAGACCGTCGAAACGACAAATCGTGCCTTGTTAA 1470 0.3925 MGSVEREMKNMREYFRSGVTKEASWRESQLKGLRRFLIEKESDIFKALMQDLGKHRVEAFRDEIGTLVKTLNLAIKCLKDWMSSKNANLPALALLTSAEIVHEPLGLVLIISSWNFPFGLSLEPLIGAIAAGNTAVLKPSELSASCSSLLASGIATYLDNKAIKVIEGGPEESQLLLQQKWDKIFFTGSARVGRIVMSAAATHLTPVTLELGGKCPAVVDSLSSSWDLEVTVKRIIVGKYGTCAGQACIAIDYVIVEKSYCSKLVELMKVWIKKMFGDNPKHSNTIARIVNKQQLARLKKLLIDPKVKESVVYGGSVDEENLFIEPTILVDPPLDAAIMVDEVFGPLLPIITVEKIEDSIEFISSRPKPLALYVFTKNQTLQNRMISETSSGSVTFNDAILQYAADSLPFGGVGASGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWYRYPPWTANKFQLLEVSYNYDYLGLILVILGLKRPSKRQIVPC 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02639 489 PIRSF ALDH 2 472 IPR012394 GO:0006081
Vivi5g02639 489 Pfam Aldehyde dehydrogenase family 4 436 IPR015590 GO:0016491
Vivi5g02639 489 PANTHER ALDEHYDE DEHYDROGENASE 3 471 IPR012394 GO:0006081
Vivi5g02639 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 416 IPR016163 GO:0016620
Vivi5g02639 489 FunFam Aldehyde dehydrogenase 12 216 - -
Vivi5g02639 489 SUPERFAMILY ALDH-like 4 453 IPR016161 GO:0016491
Vivi5g02639 489 FunFam Aldehyde dehydrogenase 213 416 - -
Vivi5g02639 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 434 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02639 Vivi-Chr5 111425826 111432057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02639 3 480 Aldehyde Dehydrogenase Gene Family AT4G36250 55.021 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02639 K00128 - gmx:100817701 795.038