Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02614 ATGGGTAACGGAATAGGAAAACTAACGGTGTGTTTCACGGGAAGCGATAAGGGTCGGAAACACGATATATCAATTCTAATAACTGACCCGTTAGATGAAGGACTCGGTCACTCTTTCTGTTACGTTAGACCCGACCCGACCCGGTTATCGAGTTCGAAGGTTCATTCTGAAGAAACGACGACGTTTAGAACTATCTCCGGGGCTTCTGTTAGTGCTAACACGTCGACGCCGTTATCGACGGCGTTTATGGATTTATACTCTTACGGTTGTTTCGATAGAGCTGCGGCGTTTGAGAGTTCAACTTCTTTTGCTTCTCTTCCGTTGCAACCGATTCCGAAGAGTCTGATGGGGACCGGTTCGGGTCCTTTTTCGAGTAATTTTGGAGGTGGCGGTGGTTTTCCGAGTTCCGGTCCGCTAGAGCGTGGGTTCATGTCCGGTCCGATTGAGAGGGGGTTCATGTCCGGTCCGATTGATCGTGGTTTATTTTCCGGTCCGATTGAAAAGGATAACTCGGATCAGGGTTTTCCGAGAAGCTTCTCTCATAGTGGATTAGGGGTTTCGGTTAGACCTAGAACGAGGAAGGAAAAATGGATTCGTGTTCTTCAGAGAGCGATTTCGAAGACTCTGTCGCGTGGACAGAGCTCGATTGTTACTCCGATCAAAGGTGTGGCGGTGAAGGAGCCGCCGGAGTGGATCCTTGCTGGGGAGAAGCATAACGAGAATTTGACGGTGAGTAGTTTGAATTTGAGTAGTGAAGGTAGTTTGGAAGATGATGATTCGATGGGGAGTCAGAATCTGCAATGGGCTCAGGGGAAAGCTGGGGAGGATCGTGTTCATGTTGTTGTTTCTGAAGAGCATGGTTGGGTTTTTGTTGGGATTTATGATGGTTTTAATGGTCCTGATGCGCCGGATTATTTACTTTCGAATCTTTATGGTTTTGTTCACAAGGAGCTTAAAGGGTTGCTTTGGGATGATGGGGTTTCGGCGGATAATTCGAATTTGAAAGCGCGCGATTCGGTTGAGGATGTTGATGTTGTTGAAGGAAAAGAAGGTAAGGTGTTTGATGATTGTTCTCAATGTGTTGGTCAAGAGAAAGGGGATTTGGTTTCGAAGAGAAAAAAGAGAGGGAAGAATTCGAAGAATAAGTACAAAGATGCAGCGATGAAACACGAAGAAAATCATAGGAGATGGAAATGTGAATGGGATAGGGAGAGACTAGAGCTTGATAGAAGATTGAAGGAGCAACTTAGTGGTGACGACGGCGACAACGATTCTGTTAATCATTCAGATGTTTTGGAAGCTCTATCTCGAGCTTTGAGGAAAACCGAGGAGTCTTATCTTGATGTTGCTGATAAGATGGTGATGGAGAATCCAGAACTTGCTTTGATGGGTTCATGTGTTCTTGTAATGTTGATGAAAGGGGAAGATGTTTATGTGATGAATGTGGGAGATAGTAGAGCTGTGTTAGCGCAAAAGGCTGAACCTGATTATTGGATTGGGAAAATTAGACAGGATTTGGAGAGGATTAATGAAGAGACAATGCATGATCTTGAATCATGGGAGGATGCTGATAAATCAAATTCTATTCCTAGTTTAAATGCTCTTCAGCTTACCAAAGATCATAGTACCAATGTTGAAGAGGAAGTAATCAGAATAAGAAAAGAGCACCCCGATGATCCTTGTGCCGTAGTCAATGAACGTGTTAAGGGATCTCTCAAGGTTACTCGAGCATTCGGTGCCGGGTTTCTCAAACAGCCCAAATGGAACAATGCACTTCTGGAGATGTTTAGAATCGACTACGTAGGAAATTCTCCATACATCACTTGCCTACCATATCTTAAACACCACAGATTAGGCCAGAAAGACAAGTTCTTGATTCTATGCTCCGACGGTCTCTATCAATACTTATCAAACGAAGAAGCAGTAGCGGAAGTTGAACTTTTCATCACATTGCAACCTGAAGGAGACCCTGCCCAACATTTGGTCGAAGAAGTCTTGTTTCGTGCCGCAAAGAAAGCAGGTTTGGACTTTCACGAATTGCTCGAGATTCCACAAGGCGATAGGCGGCGTTACCACGACGATGTCTCCATCATTGTTATTTCTTTGGAAGGAAGGATATGGAGATCATGTGTATAA 2136 0.4448 MGNGIGKLTVCFTGSDKGRKHDISILITDPLDEGLGHSFCYVRPDPTRLSSSKVHSEETTTFRTISGASVSANTSTPLSTAFMDLYSYGCFDRAAAFESSTSFASLPLQPIPKSLMGTGSGPFSSNFGGGGGFPSSGPLERGFMSGPIERGFMSGPIDRGLFSGPIEKDNSDQGFPRSFSHSGLGVSVRPRTRKEKWIRVLQRAISKTLSRGQSSIVTPIKGVAVKEPPEWILAGEKHNENLTVSSLNLSSEGSLEDDDSMGSQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYGFVHKELKGLLWDDGVSADNSNLKARDSVEDVDVVEGKEGKVFDDCSQCVGQEKGDLVSKRKKRGKNSKNKYKDAAMKHEENHRRWKCEWDRERLELDRRLKEQLSGDDGDNDSVNHSDVLEALSRALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWIGKIRQDLERINEETMHDLESWEDADKSNSIPSLNALQLTKDHSTNVEEEVIRIRKEHPDDPCAVVNERVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYITCLPYLKHHRLGQKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02614 711 Coils Coil 503 523 - -
Vivi5g02614 711 FunFam probable protein phosphatase 2C 4 233 707 - -
Vivi5g02614 711 Pfam Protein phosphatase 2C 422 658 IPR001932 -
Vivi5g02614 711 PANTHER PROTEIN PHOSPHATASE 2C 257 700 IPR015655 GO:0004722|GO:0006470
Vivi5g02614 711 ProSiteProfiles PPM-type phosphatase domain profile. 258 702 IPR001932 -
Vivi5g02614 711 CDD PP2Cc 408 702 IPR001932 -
Vivi5g02614 711 MobiDBLite consensus disorder prediction 368 387 - -
Vivi5g02614 711 SUPERFAMILY PP2C-like 272 703 IPR036457 -
Vivi5g02614 711 Gene3D - 238 707 IPR036457 -
Vivi5g02614 711 SMART PP2C_4 259 700 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02614 Vivi-Chr5 110451251 110454660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02614 1 711 PP2C-type Phosphatase Gene Family AT1G07630 68.232 0.0 936
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02614 - - pvu:PHAVU_011G064200g 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02614 5 110451251 110454660 Vivi5g02614 5 110451251 110454660 ECH