Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02581 ATGGCGAAGACACTGATTTCTTCTCCATCATTCATCGGAACTCCACTTCCTTCACTTCATCGTAGTTTCTCCCCGAATCGCACCAGGCTGTTCACCAAAGTTCAATTCAGTTTGCACCAAATTCCTCCAATTCAATCCCTAAGTCATTCGGTTGACTTGTCCGGAATCTTCGCTAGAGCTGAAGGTTTACTTTACACGCTCGCTGATGCTACTGTTGCGGCGGATGCTGTTAGTTCTACTGATGTTGCGGTGCAGAAGAGCGGTGGTTGGTTTGGGTTTATTTCTGATGGAATGGAGTTTGTTCTCAAGGTGTTAAAGGATGGTTTATCTACCGTGCATGTGCCTTACTCGTACGGATTTGCTATTATATTACTCACTGTTATTGTTAAGGCAGCTACACTTCCTTTGACAAAGCAACAGGTTGAATCAACCCTAGCTATGCAAAACCTTCAACCTAAAATTAAGGCCATTCAAGAAAGATATGCCGGCAATCAGGAAAGAATACAACTTGAGACTTCAAGGCTATATACCCAGGCTGGGGTTAACCCGTTGGCAGGTTGTTTACCAACTTTGGCTACTATTCCAGTCTGGATTGGTCTATACCAAGCTTTATCTAATGTGGCAAATGAGGGACTGTTAACAGAAGGTTTCTTATGGATCCCTTCTCTGGGTGGTCCCACTAGCATTGCTGCTAGACAAAGTGGATCCGGAATTTCTTGGCTTTTTCCGTTTGTGGATGGCCATCCACCTTTGGGTTGGCAAGACACTGCAGCATATCTTGTTTTACCTATTCTTCTTATTGTTTCTCAATATGTTTCGATGGAAATTATGAAACCCCCTCAGACAAATGATCCTAATCAAAAGAATACACTTCTTATTTTCAAGTTTCTCCCACTCATGATCGGCTACTTCTCATTATCTGTCCCATCAGGACTAACAATTTACTGGTTTACAAATAATGTCCTTAGCACAGCTCAACAAATATGGTTGCGCAAACTAGGAGGTGCAAAGCCCGCTGTTGATGAAAATGCTGGTGGAATTATTACTGCTGGACGAGCTAAGAGATCAGCTTCTAAGCCAGAAAAGGGTGGTGAAAGGTTTGCACAGTTAAAAGAAGAGGAGAAGAAGAAAAAGCTACTTAAGGCACTCCCAGTGGAGGAAGTTCAGCCTTTGGCGCCTGCATCTGCTTCCAATGATGTCTCAGATGTAGAAAACAAGGAACAAGAAGTTACAGAAGACTCGAACACTTCTAAAATTAGCAAAGAGGCTCAAAGTTTTTCTAGGGAAAGAAGAAGTAAGCGTTCAAAGCGGAAGCCTGTTGCATGA 1326 0.4284 MAKTLISSPSFIGTPLPSLHRSFSPNRTRLFTKVQFSLHQIPPIQSLSHSVDLSGIFARAEGLLYTLADATVAADAVSSTDVAVQKSGGWFGFISDGMEFVLKVLKDGLSTVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWQDTAAYLVLPILLIVSQYVSMEIMKPPQTNDPNQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQIWLRKLGGAKPAVDENAGGIITAGRAKRSASKPEKGGERFAQLKEEEKKKKLLKALPVEEVQPLAPASASNDVSDVENKEQEVTEDSNTSKISKEAQSFSRERRSKRSKRKPVA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02581 441 PANTHER OXA1 69 377 IPR001708 GO:0016020|GO:0032977
Vivi5g02581 441 CDD 5TM_YidC_Alb3 119 332 IPR047196 -
Vivi5g02581 441 MobiDBLite consensus disorder prediction 390 441 - -
Vivi5g02581 441 MobiDBLite consensus disorder prediction 402 416 - -
Vivi5g02581 441 NCBIfam membrane protein insertase YidC 117 331 IPR028055 -
Vivi5g02581 441 Pfam 60Kd inner membrane protein 118 332 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02581 Vivi-Chr5 108538314 108543084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02581 23 388 Chloroplast and Mitochondria Gene Families AT2G28800 71.429 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02581 K03217 - gmx:100817173 658.677