Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02545 ATGGCAAAAACAAAACACCTTCCGTCACCCCTCAAAGTACCACCCTCCGCCTCTTCCTCCGAGGAAGATTCTTCCGAAGAAGAAGTTGAGGTACCTCAATCCAAAAACCCTTCACCTCTTGCTTCCAAAAACCCTCCATCAGCTACTTCAAACTCAAACCCTAAACCACCATCATCTTCTGAATCCGAATCTGGGTCAGATTCTGAATCCAAAACCGAAACTGATTCTGATTCGGAACCGGAACCCACTCCACCTGTCAAACCACTTGCATCGAAGTCGTTGAAGATTCTAACCACTCCTTCACCGGCTAAAGCTGGAACCAAGCGTGCTATCGAGTTTCAAACCACTAGAACCAAGCGTGCGACTGATAACAACGACACTGACTCTGACTCTTCTAAGCGTTTGAAGAAGAAAGCAAACAAAACTGAACATCGTGGTTCCGGTGACGAGAAGGAAGCGGCAAGAGACTCTATCAAAAAGATATCGGCTCAGAGACTATTCAGCGAGGAAGACGAACTCGCCATTCTGAAAGGTCTAGCTGATTTCATTTCAACTAAAAATGATCCTTTGAAAAACACACAAGCATTTTACAATTTTGTGAAGAACTCTATTCGAGCTGACGCAAACAAGGGTCAACTAAGGCGTAAGGTTCTTGATCTGAAGAAAAAGTTTGAAAGAAATGATGAAAATTTCACCAAAGAACATGATCAGAAAGCTTTTGAACTTTTCAAGAAGATTGGGTTTAAAAAACAGAGAACACCGAAAAAGGGCTTGGGTTCGGATTCTGTTTCTGCAAAAGAAGTATTAGTTGCAAAGAAGGAAGATGCTGTGAAAAATGTTAAAAACAATTTGGCTTTTAAGGAAATGTCTAAGTTTGGTGATGGTTTGGGGTTGTCTTTGGCTGTTATGGAAAAGGGAATGGAATTGATGGGAGAATAA 939 0.4175 MAKTKHLPSPLKVPPSASSSEEDSSEEEVEVPQSKNPSPLASKNPPSATSNSNPKPPSSSESESGSDSESKTETDSDSEPEPTPPVKPLASKSLKILTTPSPAKAGTKRAIEFQTTRTKRATDNNDTDSDSSKRLKKKANKTEHRGSGDEKEAARDSIKKISAQRLFSEEDELAILKGLADFISTKNDPLKNTQAFYNFVKNSIRADANKGQLRRKVLDLKKKFERNDENFTKEHDQKAFELFKKIGFKKQRTPKKGLGSDSVSAKEVLVAKKEDAVKNVKNNLAFKEMSKFGDGLGLSLAVMEKGMELMGE 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02545 312 PANTHER BNAANNG10740D PROTEIN-RELATED 56 289 IPR007592 GO:0006355
Vivi5g02545 312 MobiDBLite consensus disorder prediction 113 156 - -
Vivi5g02545 312 MobiDBLite consensus disorder prediction 31 65 - -
Vivi5g02545 312 MobiDBLite consensus disorder prediction 1 156 - -
Vivi5g02545 312 MobiDBLite consensus disorder prediction 66 80 - -
Vivi5g02545 312 Pfam Protein of unknown function, DUF573 164 246 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02545 Vivi-Chr5 107346633 107347571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02545 4 246 GeBP Transcription Factor Family AT1G61730 34.231 2.35e-21 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi5g02545 DUF573 6.2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02545 - - vvo:131658367 438.343