Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02533 ATGTATGATCAATTCACAACATTTGTAAATTTTTATTACCAAACAAAGATGATTTCTCATTCCTTCTTAATAGCTTTGGTTGTGTTCCTTCTTTTTCTTCTCCAACTTTTCTCCTACTTCAAAAGAACTAAAAAATCTTCTCCTCTTGTACTACCTTACCCTAATAGTCCACCGGCTATACCAATAATTGGCCATCTTCATCTCCTTAAACCACTCATTCACCACGCCTTTCGCGACCTCTCCGATCGATATGGCCCTCTTATATCGCTTCGGCTTGGCTCGGCTCGGTTCATCGTTGTTAACACTCCATCGCTCGCCAAAGAGTTTCTCAAAAAGCACGAAGTAACCTTTTCGCATCGTAAAATGAATATAGCCATCAACATGGTTGTGTATGATGATGCAACTTTTGCTTTTGCACCGTATGGGACTTATTGGAAGTTCATTAAAAAGCTCAGTACTACTGAGCTTTTAGGTAATCGAACAATCGGGCAGTTTCTGCCCATTCGAACCCGGGAACTCCAGCTATTCATTCAAACATTGTCGAAGAAGTCTAAATCTGGAGAAAGTGTGAACCTCACGCAAGGTTTGTTGAAGCTTTCTAACAACATAATATCGCGGATGATGTTGAGCATCGAGACCTCGGGCACGGACAACCAGGCCGAAGAAGCTAGGGCTTTGGTTCGCGAGATAACGCAGCTTTTCGGGGAGTTTAATGTTTCGGATTTTATAGGAGTTTTCAAGAACTTCGACATGAAAGGTTTTAAGAAAAGAGCATTGGATATACACACGAGGTATGATGCTTTGCTGGAGAAGATTATATCTGATCGGGAGAATTCGAGAAGGAAGGCCAAGTTAGAAGGTAGTTATGAGAATGGAGAAGAGATTGTGAAAGATTTTCTAGACATTTTGCTTGATGTCTCTGAGGAGAAAGACTCTGAAGTAAATTTCACTAGAAACCATATCAAATCATTGATCTTGGACTACTTTACAGCAGCTACTGATACAACTGCGATATCAGTAGAATGGACGATATCAGAACTGTTCAACAATCCAAAGGTGTTGAAAAAGGCGCAAGAAGAAGTTGAGAGAGTAACAAGAAATGAAAGACTAGTGAGTGAAGCAGATAGTCCAGACCTTCATTACATACATGCAATCATAAAAGAAACAATGAGGCTTCACCCTCCGATACCGATGGTTATGAGGAAAGGAGCAGAAGATTGTGAGGTTGATGGAAAGATGATTCCAAAAGGATCATTGGTTTGTATAAACACTTGGGCTATGGGAAGAGACCAAAAGATTTGGGAGAATCCATTAGAGTTTAGGCCTGAAAGGTTCTTGGAAAGTGAAGGAGGGAGTAGTATAGATATAAAAGGACATCACTTTGAGTTGTTGCCATTTGGTTCTGGAAGGAGAGGTTGTCCTGGTATGCCTTTGGCCATGCGTGAATTGCCAACTTTTATTGGAGCTTTGGTGCAATGCTTTGAGTGGAAGATGATTGATTCTGAGGGGAAAATCTTAGGTAATGGTAAGAAGATTGATATGGATGAAAGACCAGGATTGACTGCTCCTAGAGCTAATGATCTTGTTTGTATTCCTGTTGCAAGGTTGAATCTTGATCCTTTGCTTCAACTTTAG 1635 0.4055 MYDQFTTFVNFYYQTKMISHSFLIALVVFLLFLLQLFSYFKRTKKSSPLVLPYPNSPPAIPIIGHLHLLKPLIHHAFRDLSDRYGPLISLRLGSARFIVVNTPSLAKEFLKKHEVTFSHRKMNIAINMVVYDDATFAFAPYGTYWKFIKKLSTTELLGNRTIGQFLPIRTRELQLFIQTLSKKSKSGESVNLTQGLLKLSNNIISRMMLSIETSGTDNQAEEARALVREITQLFGEFNVSDFIGVFKNFDMKGFKKRALDIHTRYDALLEKIISDRENSRRKAKLEGSYENGEEIVKDFLDILLDVSEEKDSEVNFTRNHIKSLILDYFTAATDTTAISVEWTISELFNNPKVLKKAQEEVERVTRNERLVSEADSPDLHYIHAIIKETMRLHPPIPMVMRKGAEDCEVDGKMIPKGSLVCINTWAMGRDQKIWENPLEFRPERFLESEGGSSIDIKGHHFELLPFGSGRRGCPGMPLAMRELPTFIGALVQCFEWKMIDSEGKILGNGKKIDMDERPGLTAPRANDLVCIPVARLNLDPLLQL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02533 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Vivi5g02533 544 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02533 544 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02533 544 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02533 544 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02533 544 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02533 544 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02533 544 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02533 544 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02533 544 Pfam Cytochrome P450 54 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02533 544 Gene3D Cytochrome P450 43 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02533 544 FunFam Cytochrome P450 family protein 45 530 - -
Vivi5g02533 544 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 26 526 - -
Vivi5g02533 544 SUPERFAMILY Cytochrome P450 56 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02533 544 CDD CYP93 85 532 - -
Vivi5g02533 544 Coils Coil 354 374 - -
Vivi5g02533 544 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02533 544 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02533 544 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02533 544 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02533 Vivi-Chr5 107154648 107156610 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02533 51 535 Cytochrome P450 AT5G06900 41.478 2.27e-137 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02533 K23179 - gmx:100783503 766.918