Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02532 ATGATTTTTCAACCAATCTTATTAGCTCTATTTCTAGTCCTCTTTGTTTTCCTTCTCCAACGTGTTTTGTCTAAGAAAAACAACAAACCAAAGGATTGCATACCTTACCCTCCAAGTCCACCAGCACTACCAATAATTGGCCATCTTCATCTCCTCAAACCACTCCTTCACCATGCCTTTCGAGACCTCTCCGATCGATATGGCCCTCTTATATTCCTTCGACTTGGCTATGCTCGATTCGTCGTTGTTAACACTCCGTCCCTCGCTAAAGAGTTTCTCAAAACAAATGAACTAGTTTACTCTTCTAGGAAAATGAACATTGTCATCAACACTGTTGTCTATGATGATGCCACTTTTGCTTTTGCCAATTATGGGCCATATTGGAAATTCATTAAAAAGCTAAGCACTTTTGAGCTACTAGGAAATCATACCCTAGGACAGTTTTTACCTATTAGAACCCGAGAACTCCACGCGTTCATTCGCATGTTGGCGAATAAATCCAAGTCTGAAGAGACGTTGAATCTCACTCAAGCTTTGTTGTCACTTTCTAACAACATAATATCGCGAATGATGTTGAGCATCGAGACCTCGGGGACAGACAGTCAGGCCGAACAAGCTAGGGTTTTGGTTCGCGAGGTGACACAGTCTTTCGGGGAATTTAACATTTCAGATTTTATAGGATTTTGCAAAAACTTTGACTTACAAGGTCTCAAAAAGAAGGCATTGGATCTACATAAGAGGTATGATGCTTTTCTGGAAAAGATCATATGTGATCGCGAGGAATCGAGAAAGAAATTCAAGGTTGAAGGTGGAAGTGCGAATGAAGAAGAAAAACCGAAGGATTTTCTTGATATTTTGCTTGATGTTTTTGACGCAAAAGATTGTGAAGTCGACTTTACTAGGAACCATATTAAATCATTGATCTTGGATTACTTCACAGCAGCTACAGATACTACAGCTATATCATTAGAATGGGCAGTATCAGAACTATACAACAATCCAATGGTGCAAAAGAAAATGCAAGAGGAGGTGGACATAGTAGTAGGAAAGGAAAGACTAGTATGTGAAGCAGACATTCCAAATCTTCCTTATACAAATGCCGTTATAAAAGAAACATTAAGGCTTCACCCGCCGCTACCGATGGTTGCTAGAAAAGGAATACAAGACTGTGTGGTTGATGGACACATGATTCCTAAAGGCTCAATCGTTTGTGTAAACACTTGGGCCATAGGAAGAGATCCAAAGATATGGAAAAATCCATTAGAGTTTAGGCCTGAGAGGTTCTTAGAAAGTGATATAGATATGAAAGGGCATCACTTTGAGTTGCTGCCATTTGGTACTGGAAGGAGAGGTTGTCCTGGTATGCCTTTGGCCATGCGTGAATTGCCAACTGTTATTGGAGCTTTGGTGCAATGCTTTGAGTGGAAGATGCTTGATCCTGAGGGTAAGATTTTAGATCATGGCAAAAGAATTGAGATGGATGAACGGCCAGGATTGACTGCTCCTAGGGCTAATGATCTTTTCGGTATTCCAGTTGCAAGGTTGAATCCAATTCCTTTTCTTCAAGTGTAG 1572 0.4052 MIFQPILLALFLVLFVFLLQRVLSKKNNKPKDCIPYPPSPPALPIIGHLHLLKPLLHHAFRDLSDRYGPLIFLRLGYARFVVVNTPSLAKEFLKTNELVYSSRKMNIVINTVVYDDATFAFANYGPYWKFIKKLSTFELLGNHTLGQFLPIRTRELHAFIRMLANKSKSEETLNLTQALLSLSNNIISRMMLSIETSGTDSQAEQARVLVREVTQSFGEFNISDFIGFCKNFDLQGLKKKALDLHKRYDAFLEKIICDREESRKKFKVEGGSANEEEKPKDFLDILLDVFDAKDCEVDFTRNHIKSLILDYFTAATDTTAISLEWAVSELYNNPMVQKKMQEEVDIVVGKERLVCEADIPNLPYTNAVIKETLRLHPPLPMVARKGIQDCVVDGHMIPKGSIVCVNTWAIGRDPKIWKNPLEFRPERFLESDIDMKGHHFELLPFGTGRRGCPGMPLAMRELPTVIGALVQCFEWKMLDPEGKILDHGKRIEMDERPGLTAPRANDLFGIPVARLNPIPFLQV 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02532 523 FunFam Cytochrome P450 family protein 28 509 - -
Vivi5g02532 523 Pfam Cytochrome P450 37 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02532 523 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02532 523 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02532 523 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02532 523 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02532 523 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02532 523 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02532 523 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02532 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Vivi5g02532 523 Gene3D Cytochrome P450 26 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02532 523 PANTHER STEROID 21-HYDROXYLASE-RELATED 12 504 - -
Vivi5g02532 523 SUPERFAMILY Cytochrome P450 37 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02532 523 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02532 523 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02532 523 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02532 523 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02532 Vivi-Chr5 107059540 107061600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02532 12 514 Cytochrome P450 AT5G06900 39.010 8.63e-132 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02532 K23179 - gmx:100783503 766.918