Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02522 ATGCCTAGAAAAGGAATGAGAAGTATATTCTTCAAACCATCTCCTCCTTCAATGTTTTCACCACCCTCTCCTCTCCCCACTTTCTCAGACTCCTTAATGGATGAAAACATCGAAACTGCGGAATCACTTATAACCAAATGGGATTATTCTCAATCCAAACAAATCCTTACCCCTCTTTTCAGCGCCAGCACTCGCCATGAAGCGAGACAGTATCTTAACGCTGTCAAGGGTCTACAATCAGCTATGCAGTACCTCGTCACACGTGATTCCACCTCCAACACACTAGTAAAAGCTCAATTTCTAATGCAACTCGCTATGAAGACTCTCCAGAAAGAGTTTTATCGGATTCTATCAGAAAATAGAGAATGTTTAGATCCTGAAACCGTTTCCAACCGTTCCTCGGTTGATCGGAGAAGCAGTGTTAGTCTTTCCGATTGCGACGATGATGTCTCTGTCTCTGTCTCCGACGACGAGTTTCGTGTTGCTGGAAATACTATCTCTGAGACGGAGAGGGTTTCCATGCTCGCTATGGCGGACTTGAAAGCTATTGCTGATTGCATGATTTCATCTGGCTACGGAAAAGAGTGTGTCAAGGTTTATATAGTTATGAGAAAATCTATTGTTGATGAAGCGCTTTATCATCTCGGAGTTGACCGGTTAACCTTATCTCAGATTCAGAAAATGGATTGGGAAGTTATTGAGCTGAAAATCAAGACGTGGTTGAACGCTGTTAAAGTAGCCGTCGGAACTCTCTTTCACGGCGAGAGAATCCTCTGCGACGATGTCTTCGCTAACTCTTCCGGGAAGAGAATCGCCGAGTCTTGTTTTGCGGAGATAACTAAAGAAGGTGCAGCGTTCTTGTTTGCATTCCCGGAGATGGTGGCGAAATGCAAGAAAACGTCTGAGAAAATGTTCAGAACTCTTGATTTATACGAAGCAATCTTCGATCTCTGGCCACAAATTCAATCGATTTTCTCGTTTGAATCAACCTCAACCGTCCGACTACAAGCCGTTACGTCCATGGCGAAACTCGCTGACGCCGTGAGAACGATGCTAACGGATTTCGAATCGGCGATTCAGAAAGAGTCGTCAAGGAAAGAACTCCCCGGCGGCGGAGTCCATCCTATAACACGCTATGTCATGAATTACATCACCTTTCTCGCAGATTACAGCGGCGTGTTATCTGATATCGTCTCCGACTTACCACATTCTCCCTTGCCGGAGTCTTACTTCCAAAGTCCCATGCGCGGTGAGAATCAATCATCTTCAGAAATATCAGAGAAAATCGCGTGGCTGATACTTGTTCTTCTCTGCAAGCTTGACGTGAAAGCAGAGCTATACAAGGATGTGGCACTTTCGTATCTTTTTCTTGCTAATAACATGCAATACGTCGTCGTAAAGGTTCGAAGATCAAACCTAGGGTTTCTTCTCGGAGAAGATTGGTTAACGAATCATGAACTAAAAGTTAAAGAGTATGTGTCCAAATTTGTACGTTACGGATGGAATAAAGTGTTTTCCACGTTGCCGGAGAATCCCACGCCGGAGATGGCGGTGGAGAGAGTAAAGGCTAGCTTCGTTAACTTCAACGCTGCGTTTGATGGAGAGTGTAGGAAACAGTCTTCGTGGGTTGTATCCGACCCGAAACTGCGAGATGAAATCAAAGGTGCGGTTGGTTCGATGCTGTTTTCGAGGTATGGTGAATTTTATGAGATGAACCGGGTTGGGTTCGAGTCGATTGTGAGATATGAACCGGAATATATAGAAAGTTGTTTGGGTAAAATTTTGTATGGGGTTGGAGATTCGGGTAGTGTTTCGTCTTTTTCTTCGAGGACGTCTTCTTCTTCTCGTGGCTCTAATCGCCGGTGA 1866 0.4469 MPRKGMRSIFFKPSPPSMFSPPSPLPTFSDSLMDENIETAESLITKWDYSQSKQILTPLFSASTRHEARQYLNAVKGLQSAMQYLVTRDSTSNTLVKAQFLMQLAMKTLQKEFYRILSENRECLDPETVSNRSSVDRRSSVSLSDCDDDVSVSVSDDEFRVAGNTISETERVSMLAMADLKAIADCMISSGYGKECVKVYIVMRKSIVDEALYHLGVDRLTLSQIQKMDWEVIELKIKTWLNAVKVAVGTLFHGERILCDDVFANSSGKRIAESCFAEITKEGAAFLFAFPEMVAKCKKTSEKMFRTLDLYEAIFDLWPQIQSIFSFESTSTVRLQAVTSMAKLADAVRTMLTDFESAIQKESSRKELPGGGVHPITRYVMNYITFLADYSGVLSDIVSDLPHSPLPESYFQSPMRGENQSSSEISEKIAWLILVLLCKLDVKAELYKDVALSYLFLANNMQYVVVKVRRSNLGFLLGEDWLTNHELKVKEYVSKFVRYGWNKVFSTLPENPTPEMAVERVKASFVNFNAAFDGECRKQSSWVVSDPKLRDEIKGAVGSMLFSRYGEFYEMNRVGFESIVRYEPEYIESCLGKILYGVGDSGSVSSFSSRTSSSSRGSNRR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02522 621 Pfam Exo70 exocyst complex subunit 239 591 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi5g02522 621 SUPERFAMILY Cullin repeat-like 56 593 IPR016159 -
Vivi5g02522 621 PANTHER EXOCYST COMPLEX PROTEIN EXO70 28 591 IPR004140 GO:0000145|GO:0006887
Vivi5g02522 621 Gene3D Exocyst complex component Exo70 44 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02522 Vivi-Chr5 106735325 106737578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02522 6 597 EXO70 exocyst subunit family AT5G59730 49.344 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02522 K07195 - gmx:100810579 809.29