Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02494 ATGGATTTTTTCAGAGTAAATTTACCGCCAATGGATCTGATGCGTTCCGAGAAGATGACCTTCGTTCAACTCATCATTCCCGCCGAGTCCGCTCACCGAGCCATCACCTATTTAGGCCAACTCGGTCTTCTTCAATTCCGTGACTTAAATGCTGAAAAAAGTCCCTTCCAGAGAACATTTGTTAACCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTAAGATTCCTGATGGATCAGATCAATAAAGCTGGGATAATGTCTCCTAGTCCTGTCTTGCAAACAGATACATACTTGGAGGATATAGAGGTGCATCTTGCTGAGCATGAACATGAGATAATTGAAATGAACTCAAACAGTGAGAAACTTCAGCAATCATATAACGAACTCCTTGAGTTCAAGAGTGTACTGCAAAAGGCATGTAGTTTTCTTGTTTCAAATCATGGCCATGCCGTTTCAGAAGAGAGAGAACTGGAGGAAAATGTTTACTCAAATGGAGACTTTATCGAGACGCCATTTTTGTTTGAACAGGAAATGATGCCTGATCCTACAAAATCAAACCAATCTGGTTTAAGATTTATCAGCGGGATAATTTGTAAATCCAAAGTTCTCAGGTTTGAAAGAATGTTGTTTCGTGCCACAAGAGGCAATATGCTTTTCAATCAGGCACCAGCTGATGAACAAATTATGGATCCTATTTCAACTGAGATGGTTGAGAAGACAGTGTTTGTTGTGTTTTTCTCTGGGGAGCAAGCAAGAACAAAGATTCTAAAAATTTGTGAAGCATTTGGTGCAAATTGTTACCCTGTTCCTGAAGATATAAGTAAACAAAGGCAAATAACTCAGGAGGTTTCATCACGCCTTGCTGACTTAGAGGCCACTTTGGATGCTGGAATTAGGCATCGGAATAAGGCTCTATCTTCTGTAGGAGCTCATTTAGCGAAATGGATGGACATGGTAAGAAGAGAGAAGGCTGTGTATGATACGCTGAACATGTTAAATTTTGATGTCACCAAAAAATGTCTTGTGGCAGAGGGCTGGTGTCCAATTTTTGCGAGAACACAGATTCAAGAAGCACTGCAACGTGCAACTTTTGACAGCAGTTCTCAAGTGGGTGTAATCTTTCACTCAATGGATGCACTGGAATCGCCACCTACATATTTTAGGACCAACAGTTTCACCAATCCTTATCAAGAAATTGTAGATGCATATGGTGTTGCAAGATATCAAGAAGCAAACCCTGCAGTTTACACAACTATCATATTCCCATTTCTTTTTGCGGTGATGTTTGGGGACTGGGGCCATGGAATATGCTTACTGCTTGGAGCATTGGTTCTTATAGCACATGAAAGAAAACTCGGCAATCAGCGACTGGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTTCTTCTGATGTCACTATTTTCAATGTATTGTGGGTTAATCTACAATGAGTTCTTCTCGGTTCCTTTTCACATATTTGGTGCGTCTGCTTACAAATGCCGAGATATTTCATGCAGGGATGCTCGTACTACTGGCTTAGTAAAATACAGAGAACCATATCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCATTTTTGAACTCTCTCAAGATGAAGATGTCCATTCTATTTGGTGTAGTGCATATGAACTTAGGAATTATGTTAAGTTATTTCAATGCTCGTTTCTTTGGCAGTTCGCTAGATATAAGGTATCAGTTTGTGCCGCAGATGATTTTCCTCAACAGTCTATTTGGGTATCTTTCCCTTCTCATTGTTGTCAAGTGGTGTTCTGGCTCTCAGGCAGACCTTTATCATATAATGATTTACATGTTTTTAAGCCCTCTTGACAATCTTGGTGAGAATGAGTTGTTCTGGGGTCAAAGGCCACTTCAAATTTTGTTATTGGTTCTGGCTCTAATTGCAGTTCCATGGATGCTCTTTCCAAAGCCTTTTATATTAAAGAAACTTCATAATGAGAGATTTCAAGGACGCAATTACGGTGTTCTTAATACCTCCGAGGTGGATCTTGAGGTGGAACCGGATTCTGCCAGGGATTCGGCCAGGCAACATCGCGAGGAATTTAATTTCAGTGAGGTTTTTGTTCACCAAATGATTCACTCCATTGAGTTTGTTCTGGGTTCTGTTTCAAATACGGCATCATATCTCCGACTTTGGGCATTAAGCTTGGCTCACTCAGAACTTTCAACTGTTTTTTATGAGAAAGTCCTGCTACTAGCTTGGGGGTATGACAATCTTATCATTCGGTTAGTGGGGCTAATTGTTTTTGCCTTTGCAACTGCTTTTATACTACTCATGATGGAGACTCTGAGCGCTTTTCTTCATGCCCTGCGTCTTCATTGGGTTGAATTTCAAAATAAATTCTACCATGGTGATGGCTACAAGTTCAAACCTTTTTCCTTTGCCGCATTAACAGAGGATGAAAATTAA 2475 0.4073 MDFFRVNLPPMDLMRSEKMTFVQLIIPAESAHRAITYLGQLGLLQFRDLNAEKSPFQRTFVNQVKRCAEMSRKLRFLMDQINKAGIMSPSPVLQTDTYLEDIEVHLAEHEHEIIEMNSNSEKLQQSYNELLEFKSVLQKACSFLVSNHGHAVSEERELEENVYSNGDFIETPFLFEQEMMPDPTKSNQSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEQIMDPISTEMVEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQRQITQEVSSRLADLEATLDAGIRHRNKALSSVGAHLAKWMDMVRREKAVYDTLNMLNFDVTKKCLVAEGWCPIFARTQIQEALQRATFDSSSQVGVIFHSMDALESPPTYFRTNSFTNPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIAHERKLGNQRLGSFMEMLFGGRYVLLLMSLFSMYCGLIYNEFFSVPFHIFGASAYKCRDISCRDARTTGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVVHMNLGIMLSYFNARFFGSSLDIRYQFVPQMIFLNSLFGYLSLLIVVKWCSGSQADLYHIMIYMFLSPLDNLGENELFWGQRPLQILLLVLALIAVPWMLFPKPFILKKLHNERFQGRNYGVLNTSEVDLEVEPDSARDSARQHREEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLIIRLVGLIVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFKPFSFAALTEDEN 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02494 824 PIRSF ATP6V0A1 9 824 IPR026028 GO:0000220|GO:0046961
Vivi5g02494 824 PANTHER VACUOLAR PROTON ATPASES 13 822 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vivi5g02494 824 Coils Coil 99 126 - -
Vivi5g02494 824 Pfam V-type ATPase 116kDa subunit family 37 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02494 Vivi-Chr5 105991071 106003873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02494 1 817 Primary Pumps ATPases(2) AT2G28520 79.340 0.0 1333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02494 K02154 - gmx:100800799 1480.31