Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02484 ATGAAGAAGGTAATCAGTTGTTTTTCCCCAAAGGGTTCCCCCAACCGCAACCGAACCGGCAACTCTCCCCGTTCCTCTCAATCTCCTCCCACTCCGGTTTCCTCTTCCTCTTCCGCTCCGGCTTCCCCTTCAGCCTCTACTTCCGCAACTACTCTTGCAAGAATCAATGAACTTACTGCAGAAGCGGAGACTCTAAATTTAAATTTAGGACCTTTGCCTATACAGAAATTCCCTTTTATGCAACTTCACTTTGCAACAGATGGTTTTAGCGCTGAAAACTGCGTGGCTAAAGGAGGTTTCGGCCGTGTTTACAGAGGAAACTTGGCTCCACAGAATCAAGAAGTAGCTATAAAGTGTCTTGACCCGAAAAGCCAGCAAGGAACCCGGGAATTCGTTACTGAGGTGGAGTTTCTGAGTAACGCAGACCACGAAAACATTGTCCGGTTGATTGGATATTGTGCTGAGAATGAGCACAGGATGATAGTTTATGAGTACATTAGGATGGGATCTTTGGAAGCTCATTTACTAACCCGTAATCCAGATTTGAACCTTGCAGTTCTGGATTGGAATACAAGAGTTAGAATAGCATATGAAACAGCAAAGGGTTTGCAGTATCTGCATAGTAATATGCAGCCTCGGAGAATATACAGGGATCTAAAATGTGCAAACATTTTGTTAGGGGAAGGTTATACTGTAAAGTTATCTGATTTTGGATGTGCTAAAAAAGCCCCAGCTAATGAACGTGAACGTAACTTGACAAGGGTTTTAGGCACAGTAGGATATTTAGATCCAGCGTATTTTACAACAGGCAATTGTACAGTCCAAAATGATATTCACAGCTTTGGTGTTGTTCTTTTGGAGCTCGTCACTGGTAGAAAATGTATTGATGAAAGAAGACCAACCGAGGAACAAAGTCTCCTTATATGGGCAAGAAGAGTATTTGGTAATAGGGACAGATACGAAGAAATTGTTGATCCATTGCTAAATGGTAACTTTAATGAGCGGAGTTTACATGCACTTGTTCGTATGGCTGAATATTGTGTTAATAGCGACTCTATGAAGAAGCCCAAAATGAGTCATATTGTCGATATTTTAGGACAATTGAATCGTGCAGCTGATGAACCAAACATTCCCTAG 1137 0.4195 MKKVISCFSPKGSPNRNRTGNSPRSSQSPPTPVSSSSSAPASPSASTSATTLARINELTAEAETLNLNLGPLPIQKFPFMQLHFATDGFSAENCVAKGGFGRVYRGNLAPQNQEVAIKCLDPKSQQGTREFVTEVEFLSNADHENIVRLIGYCAENEHRMIVYEYIRMGSLEAHLLTRNPDLNLAVLDWNTRVRIAYETAKGLQYLHSNMQPRRIYRDLKCANILLGEGYTVKLSDFGCAKKAPANERERNLTRVLGTVGYLDPAYFTTGNCTVQNDIHSFGVVLLELVTGRKCIDERRPTEEQSLLIWARRVFGNRDRYEEIVDPLLNGNFNERSLHALVRMAEYCVNSDSMKKPKMSHIVDILGQLNRAADEPNIP 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02484 378 PANTHER OS07G0668900 PROTEIN 64 373 - -
Vivi5g02484 378 SUPERFAMILY Protein kinase-like (PK-like) 69 365 IPR011009 -
Vivi5g02484 378 MobiDBLite consensus disorder prediction 10 50 - -
Vivi5g02484 378 Pfam Protein tyrosine and serine/threonine kinase 93 310 IPR001245 GO:0004672|GO:0006468
Vivi5g02484 378 Gene3D Phosphorylase Kinase; domain 1 49 165 - -
Vivi5g02484 378 SMART serkin_6 89 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g02484 378 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 65 165 - -
Vivi5g02484 378 ProSiteProfiles Protein kinase domain profile. 89 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g02484 378 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 166 376 - -
Vivi5g02484 378 MobiDBLite consensus disorder prediction 1 50 - -
Vivi5g02484 378 Gene3D Transferase(Phosphotransferase) domain 1 167 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02484 Vivi-Chr5 105653463 105654999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02484 75 373 Glycoside Hydrolase AT3G07070 47.826 1.91e-93 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Vivi5g02484 PK_Tyr_Ser-Thr 5.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02484 - - vvo:131605113 716.072