Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02457 ATGGACACAGTGTTGGTGCCGCCATGGCTTGAGCCATTGCTGAAAACACCGTTTTTCAATATGTGCCGGATTCACGCCGATGCGGCCAGAAATGAGTGTAACATGTATTGTTTAGACTGCAACAATGGCGACGGCGCCTTCTGCTTTTATTGCCGTTCTTCACGGCACAAAGATCATCCGGTCATTCAGATAAGAAGATCATCTTATCACGATGTAGTGAGGGTGTCAGAGATTCAGAAAGTGTTGGACATAAGTGGAGTACAAACATATGTGATAAACAGTGCCAGAGTTTTGTTCTTGAATGTGAGGCCTCAACCAAAATCTGGGAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGGAGTCTCTTGGATTCATTTAGGTTCTGTTCTTTGGGATGTAAGCTTGAAAGAATAAAGAAAAATGGAGATGCAAGCTTTGCCATGGAGGGGGGTAAGAATGAAGCAATGAGAATGGAGGGGGTATCAAGTAGTAGATCAGAAGAAGAATTGCGTGAAGGCTCAACACAAGATATGTATCCAGTCACGCCTCCTCCACCTCCTTTAAATGCAAGAAGAAGAAAAGGTATTCCTCATAGGGCACCTTTTGGTTCTTCTTCATTCTAA 627 0.4338 MDTVLVPPWLEPLLKTPFFNMCRIHADAARNECNMYCLDCNNGDGAFCFYCRSSRHKDHPVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDSFRFCSLGCKLERIKKNGDASFAMEGGKNEAMRMEGVSSSRSEEELREGSTQDMYPVTPPPPPLNARRRKGIPHRAPFGSSSF 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02457 208 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 203 - -
Vivi5g02457 208 SUPERFAMILY B-box zinc-binding domain 19 66 - -
Vivi5g02457 208 MobiDBLite consensus disorder prediction 156 208 - -
Vivi5g02457 208 Pfam PLATZ transcription factor 65 136 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02457 Vivi-Chr5 104282169 104284777 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi5g02457 PLATZ 8.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02457 - - psat:127125735 395.201