Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02362 ATGAAGTCACAGATCAAAATTGCTCTTGCTATTATTATTAGTTTGCTCTGGATTCAACACTCCTTTTGTGATGAAGCATCTGACACATCTAGTCTAAACAAGTGGAAATGTAGATGTGCTTCTTTCGAAGGAAACCAAAGCAACTTACTTGCTAATTGTTCGAAATCATGTGATTGCCATTCAGATTCTGAAGAGGATGCATCCATATGGACATGCATATGTGGTCCCAATGGATTTCCCCAAGTGGCAGAAGATGGTCATAGCGCTAAGTGCTTTCATGCTTGCAACTGCACCTGGGGAACTGTCAGCACATCATTAGGTTCAAAGAAACACATTTCAAGCAAGGTTGTTGTAATTGTCCTATTAATATGTGTTATATGCACAACCATTGCGTTGATTACCACAATTGTATGCTACGTCTACCGAAGGAAGCAATACTCTATTCAATCACCAATATTCTCAGTAGATAAGGAAACAAGTAGTGGTAGTACCGCCAACCTAATCAGTCATCGGACAGGAACTTCTTCAGTACCAGAAACAACATTTTTCGTGAATTCTCCTATTTGTCATATCACGGGTTGCTTTAAGAAACCCTCTTTTTTGTTTGGGAGCCAAAAAGAAACTTTTCATGGAAATATAATTCAATTTTCATATGGTGAACTGGAAAGTGCTACTGATAACTTTTCAGCTACCAACCTTATTGGACTAGGCGGAAGTAGTTATGTATACCGTGGTCGCCTGAGAGATGGTAACATTGTGGCAGTTAAGCGATTAAAAGATCAAGGAGGGCCAGAAGCAGACTCTGCATTTTTCAAGGAGATTGAATTAATATCTCGACTTCATCATTGTCATTTGGTGCCTTTGCTTGGATACTGCTTAGAATCGAAAGGAAAACACATGCAGAGGTTACTGGTATTTGAGTACTTGATTAATGGAAGTTTGAGGGACTGGTTAGACGGAGTTTCTGGAAAATACCTGGATTGGACTACTCGTGTTACGATTGCAATAGGAGCAGCAAGGGGCTTGGAATATCTCCATGAAGCAGCTGCTCCAAAAATTCTTCATAGAGATGTGAAATCAACCAACATTCTTCTGGATGAAAAATGGCAAGCAAAAATAACCGATCTTGGTATGGCTAAAAACTTGAGATCTGATGACCTACCAAGCGGTTCAGATTCTCCAGCAAGAATGCAAGGAACATTTGGGTATTTTGCACCCGAGTATGCTATTATTGGTCGAGCCTCACTTGAATCAGATGTCTTCAGTTTTGGTGTGGTACTTCTTGAGCTTATCAGTGGTCGACATCCTATTCATAAAACTACCGGCAAAGAAGAAAGCCTTGTTATATGGGCTTCTCCTCGTTTACAGGATAGCAGGCGAGTAATATCGGAGATAGTTGATCCACAATTGAAAGGAAACTTCCCAGAAGAAGAGGTGCATATAATGGCATATCTAGCAAAGGAATGCTTGCTATTGGATCCCGATACTCGACCTACCATGAGCGAGGTTGTTCAAATTCTTTCTAGTATTTCACCTGGCAAATCAAGGAGGAGAAGAAACATTTCCACCAGCTTGTTTCAGGAACCAGAGGATGTAGAAACAAAAAGGCAAGCTCATTCCAGTGAATTTCCAGCTCATAATTTATCACCACTAGATACCGATTACAATCCGTGTCTTGGAAACAAAAATAGAGAAGAAGATGCAGTTTCAGCTGAGTATATGGAAAGTTTGATTCTCTTGGCATCAAAATCTAATAGCTCGCATTCATCAGAAGAAGAGGAAATGGTAGACATAACAGAGCCTCGGTTCGAATCATTTTGCATGACAAATGGCACTGTCACTTGA 1845 0.4022 MKSQIKIALAIIISLLWIQHSFCDEASDTSSLNKWKCRCASFEGNQSNLLANCSKSCDCHSDSEEDASIWTCICGPNGFPQVAEDGHSAKCFHACNCTWGTVSTSLGSKKHISSKVVVIVLLICVICTTIALITTIVCYVYRRKQYSIQSPIFSVDKETSSGSTANLISHRTGTSSVPETTFFVNSPICHITGCFKKPSFLFGSQKETFHGNIIQFSYGELESATDNFSATNLIGLGGSSYVYRGRLRDGNIVAVKRLKDQGGPEADSAFFKEIELISRLHHCHLVPLLGYCLESKGKHMQRLLVFEYLINGSLRDWLDGVSGKYLDWTTRVTIAIGAARGLEYLHEAAAPKILHRDVKSTNILLDEKWQAKITDLGMAKNLRSDDLPSGSDSPARMQGTFGYFAPEYAIIGRASLESDVFSFGVVLLELISGRHPIHKTTGKEESLVIWASPRLQDSRRVISEIVDPQLKGNFPEEEVHIMAYLAKECLLLDPDTRPTMSEVVQILSSISPGKSRRRRNISTSLFQEPEDVETKRQAHSSEFPAHNLSPLDTDYNPCLGNKNREEDAVSAEYMESLILLASKSNSSHSSEEEEMVDITEPRFESFCMTNGTVT 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02362 614 FunFam receptor-like serine/threonine-protein kinase NCRK 202 308 - -
Vivi5g02362 614 PANTHER OS01G0750732 PROTEIN 29 526 - -
Vivi5g02362 614 Gene3D Phosphorylase Kinase; domain 1 202 308 - -
Vivi5g02362 614 SUPERFAMILY Protein kinase-like (PK-like) 208 507 IPR011009 -
Vivi5g02362 614 Pfam Protein kinase domain 231 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g02362 614 ProSitePatterns Protein kinases ATP-binding region signature. 234 256 IPR017441 GO:0005524
Vivi5g02362 614 ProSiteProfiles Protein kinase domain profile. 228 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g02362 614 CDD STKc_IRAK 234 510 - -
Vivi5g02362 614 SMART serkin_6 228 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g02362 614 FunFam receptor-like serine/threonine-protein kinase NCRK 309 519 - -
Vivi5g02362 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Vivi5g02362 614 Gene3D Transferase(Phosphotransferase) domain 1 309 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02362 Vivi-Chr5 100291233 100298030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02362 1 610 Receptor kinase-like Gene Family AT2G28250 50.162 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Vivi5g02362 Pkinase 7.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02362 - - gmx:100817870 961.829