Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02334 ATGAACAAAAGAGATAGAATAAAGAAACATTATGGTTTTGTTGTTGTAATTGTTGTATTGTTCAGTTTTAGTGCTGGCCCACAGCTTGTTTCTTGTCAGAAAAATGCTGCTGGTGGTGGTGGTGGCGGTGGTGGTAGTTCAGGTGCTGGTTTTGAGATATTTGCTAAGGAATTGTATAATAGTATGTCCAATTATACAAATGTTTTCAAAGGTGCAATCAAGAAAGAGTTGGGTTATTGCATACTGGATGTGGATGCTGATTGGGATGGTGCTTTCAATTTCACCAAAGATCTCACATTTTTGACCATGTGTGCCCAACAAATGAAAGGAGATATTACACAAAGGATGTGCACGGCGGGAGAAATAGAAGCATATGCTAGAAGTTTTGCAGGAGGTTCTGGAAAAGCCAAAGGAAACTTATTGAAGCCAAACCTAAACTGTAATTTGAGTACTTGGCTTAATGGATGTGAGCCTGGTTGGGGTTGCAAAGCTAATATGAAAATTGACCTTAATAGTAAGAAGAAGGAAATACCTGCTAGATCTGTTGATTGCCAACCTTGCTGTGAAGGGTTCTTTTGTCCTCGTGGCATCACATGCATGATACCTTGTCCTTTGGGCTCGTATTGTCCTCGAGGGGAGCTCAATAAAACTAGTGGAATATGCGCACCATATCGATATCAGTTGCCTCCTGGAAAAGATAACCATAGTTGTGGAGGAGCAGATCTTTGGGCCGACGTTGCAAGTAGTGGCGAGGTTTTCTGTTCAGCAGGAGCATATTGTCCATCTACAATCATACACAATCCTTGCAGTCGAGGGTATTACTGCAGAACAGGTTCTACGGCTCAAGAGAGATGTTTCAGGCTTGCAAGTTGTGAGCCTAAATCGGCAAATCAAAATATTACTGCATATGGTCTCCTGGTTTTTGCCGGCTTGTGTTTTTTGCTGATTATCATATACAACTGTTCCGATCAAGTTCTCGCGACTCGAGAAAGAAGACAGGCGAAATCAAGAGAAAGGGCTGCTGCAAGTGTGAGAGAAACACAAGCGCGAGAAAAATGGAAATCAGCAAAAGACATTGCTAAGAAACATGCATCAGGACTACAATCCCAATTATCGCGTACATTTTCGCGCAAAAAAACATCGAAGATGCCGGATTTTAAAGGTGTGTTACCACCTATGGGAGGTGGTGCATCCAAAGGAAAGAAAAAGGATAAAAACAACCTCTCAAAAATAATAAACGATATTGAGCAAGATCCTGATAGTCAAGAAGGGTTCAATGTACAAATAGGAGATAAGAATGTGAAAAAGCAAGCACCGAGGGGTAAGCAGTTGCATACTCAGAGTCAAATTTTCAAGTACGCATACGGTCAGATCGAAAAGGAAAAGGCATTACAGGAACAAAATAAGAACTTGACATTCTCTGGAGTGATTTCAATGGCTAATGACATTGATATAAGGAAAAGGCCTACGATTGAGGTTGCTTTTAAAGACTTAACACTCACTTTGAAAGGGAAAAACAAACATCTGTTAAGATGTGTGACTGGTAAGATATATCCGGGCCGAGTTTCTGCAGTCATGGGTCCATCTGGGGCTGGTAAGACAACATTTCTTTCTGCTTTAACTGGAAAAGCAACTGGATGCCACACAACTGGTCAAGTTCTTGTAAATGGTCAGGAGTCCTCTATTCGATCATTCAAGAGGATCATTGGCTTTGTTCCACAAGATGATATCGTCCATGGAAATTTGACAGTTGAAGAGAATCTGTGGTTTAGTGCCAGATGCAGACTCTCGGCTGATCTACCGAAAGAAGAGAAGGTGTTGGTGGTTGAAAGAGTCATTGAATCCTTGGGTCTGCAGGCAATACGAGATTCTTTGGTTGGGACAGTGGAGAAACGAGGAATCTCTGGAGGTCAAAGAAAGAGAGTAAACGTCGGATTAGAAATGGTTATGGAACCTTCTCTTCTAATCCTGGACGAACCTACATCCGGTTTGGACAGTTCATCTTCACAGTTACTGCTTAGAGCACTTAGACGCGAAGCTCTTGAAGGTGTAAACATATGTATGGTCCTTCACCAACCAAGTTACACGTTGTTCAAGATGTTTGACGATTTTATACTGCTAGCTAAAGGAGGTCTTACAGTGTATCATGGACCTGTGAACAAAGTGGAAGAGTACTTCTCTAGCATGGGGGTCGTTGTCCCTGACCGTGTCAACCCTCCCGATTACTACATCGACATTTTAGAAGGAATATTAAAACCAAGTGCGAGTTCAGGAGTGAACCATAAACAACTACCAGTTAGATGGATGCTTCATAACGGATATCCTGTGCCTATGGATATGCTGCATACTATAGAAGGAATGTCTGCTCCAACCAATGTTCCAACACAAGGAGGACCTAACCCTAATGCAAAGCTTACTGCCGCACCTTCTTTTGCCGGAGAACTTTGGCAGGACGTGAAGTGCAACGTTGAGATGAAGAGAGATAATCTTCAACTCAACTTCTTAACTTCAAACGATTTGTCCAATAGGACTACACCAGGATCATTCACACAGTACAAATACTTTCTTGGAAGAGTTGGTAAGCAGCGGTTGCGAGAAGCTAGAACGCAAGCTGTAGATTTTCTGATTCTGCTGCTGGCTGGTGTTTGTTTAGGAACACTTGCCAAAGTGAGCGATGAATCGTTTGGAGCAACGGGTTATACATACACCGTAATTGCAGTATCACTCCTTTCCAAGATTGCTGCTCTGAGATCGTTCTCATTGGATAAGTTACATTACTGGAGAGAAAGCGCTTCTGGAATGAGTAGTCTCGCTTACTTTCTTTCAAAGGATACAGTTGACCATTTCAGTACAATTATCAAACCTTTGGTTTATCTCTCCATGTTCTATTTCTTCAACAATCCAAGATCATCTTTCACAGATAATTACATTGTTCTACTATGTTTGGTGTATTGTGTCACGGGCATAGCTTATGTGTTGGCAATTTTCCTTCAACCAGGTCCAGCCCAGCTATGGTCCGTGTTATTACCAGTAGTTTTGACTCTGCTAGCAACTTATGACAATGAAGAAGGTAGCAAATATATCGAATTTATATCTGATCTGTGCTACACCAAGTGGGCTCTTGAAGCATTTGTTATATCAAATGCTAAAAGATATTCTGGAGTTTGGTTAATAAGCCGATGTGGTGCACTCCACAAATACGGCTATGATCTCAAACATTGGTACCAATGTTTAGGACTCCTTGTTGTGACGGGAATAATTAGTCGCATGCTTGCATTTTTTTGTATGATGACATTCCAGAAGAAATAG 3309 0.4149 MNKRDRIKKHYGFVVVIVVLFSFSAGPQLVSCQKNAAGGGGGGGGSSGAGFEIFAKELYNSMSNYTNVFKGAIKKELGYCILDVDADWDGAFNFTKDLTFLTMCAQQMKGDITQRMCTAGEIEAYARSFAGGSGKAKGNLLKPNLNCNLSTWLNGCEPGWGCKANMKIDLNSKKKEIPARSVDCQPCCEGFFCPRGITCMIPCPLGSYCPRGELNKTSGICAPYRYQLPPGKDNHSCGGADLWADVASSGEVFCSAGAYCPSTIIHNPCSRGYYCRTGSTAQERCFRLASCEPKSANQNITAYGLLVFAGLCFLLIIIYNCSDQVLATRERRQAKSRERAAASVRETQAREKWKSAKDIAKKHASGLQSQLSRTFSRKKTSKMPDFKGVLPPMGGGASKGKKKDKNNLSKIINDIEQDPDSQEGFNVQIGDKNVKKQAPRGKQLHTQSQIFKYAYGQIEKEKALQEQNKNLTFSGVISMANDIDIRKRPTIEVAFKDLTLTLKGKNKHLLRCVTGKIYPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGQVLVNGQESSIRSFKRIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIESLGLQAIRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFKMFDDFILLAKGGLTVYHGPVNKVEEYFSSMGVVVPDRVNPPDYYIDILEGILKPSASSGVNHKQLPVRWMLHNGYPVPMDMLHTIEGMSAPTNVPTQGGPNPNAKLTAAPSFAGELWQDVKCNVEMKRDNLQLNFLTSNDLSNRTTPGSFTQYKYFLGRVGKQRLREARTQAVDFLILLLAGVCLGTLAKVSDESFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESASGMSSLAYFLSKDTVDHFSTIIKPLVYLSMFYFFNNPRSSFTDNYIVLLCLVYCVTGIAYVLAIFLQPGPAQLWSVLLPVVLTLLATYDNEEGSKYIEFISDLCYTKWALEAFVISNAKRYSGVWLISRCGALHKYGYDLKHWYQCLGLLVVTGIISRMLAFFCMMTFQKK 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02334 1102 SMART AAA_5 519 720 IPR003593 GO:0016887
Vivi5g02334 1102 FunFam ABC transporter G family member 24 487 729 - -
Vivi5g02334 1102 MobiDBLite consensus disorder prediction 335 361 - -
Vivi5g02334 1102 Pfam ABC-2 type transporter 691 1102 IPR043926 GO:0140359
Vivi5g02334 1102 Pfam ABC transporter 513 662 IPR003439 GO:0005524
Vivi5g02334 1102 ProSitePatterns ABC transporters family signature. 634 648 IPR017871 GO:0005524|GO:0016887
Vivi5g02334 1102 CDD ABCG_EPDR 491 717 - -
Vivi5g02334 1102 MobiDBLite consensus disorder prediction 335 404 - -
Vivi5g02334 1102 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 494 733 IPR027417 -
Vivi5g02334 1102 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 493 734 IPR003439 GO:0005524
Vivi5g02334 1102 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 445 1089 - -
Vivi5g02334 1102 Gene3D - 482 732 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02334 Vivi-Chr5 99255636 99262401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02334 520 715 Calmodulin-binding Proteins AT2G36910 27.907 1.41e-11 67.0