Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02293 ATGACAGAAATAAAAAAGGTTGTTGTCAATGGAATGTCAAAGTTCAAGAATAATGTCTTCAAAAAGCTTCAAAAGTGTTTCTTAATGGAAAGAAATGATGATGAATCAAAGGATGTGAAAAAAGGGCATTTTGTTGTGATTGCTGAGGATGAGGAGGACATAAAGAGATTTGTTGTGCCATTGAGATTTTTAACAAATCCAATTTTTGTGAGACTATTGGAACAAGCAGCTGAAAAATATGGATTTAAGGGAAATGGTGCATTAACTGTTCCTTGTAGACCAAATGAGTTTCAGATGTTGATGGTACAGGAAGGAAGGCCTAGTTTTAATTTTCAATTTGAAGCAAATTATGTGTAG 357 0.3333 MTEIKKVVVNGMSKFKNNVFKKLQKCFLMERNDDESKDVKKGHFVVIAEDEEDIKRFVVPLRFLTNPIFVRLLEQAAEKYGFKGNGALTVPCRPNEFQMLMVQEGRPSFNFQFEANYV 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02293 118 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 100 IPR003676 GO:0009733
Vivi5g02293 118 Pfam Auxin responsive protein 25 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02293 Vivi-Chr5 96819757 96820113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02293 38 101 Calmodulin-binding Proteins AT3G43120 43.750 4.88e-13 60.1