Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02281 ATGGGAAGAGCTCCATGTTGTGACAAAACAAGTGTGAAGAGAGGTCCATGGTCACCAGAAGAAGACTCAAAACTCAAAGATTACATAGAGAAACATGGCACTGGTGGGAATTGGATTTCTCTTCCTCATAAAGCTGGTTTGAAGAGATGTGGAAAAAGTTGTAGATTGAGATGGCTTAACTATCTTAGGCCAAACATTAAGCATGGAGATTTTTCTGATGAGGAAGACAGAATAATTTGCAGTCTCTATGTTAATATTGGAAGCAGGTGGTCAATCATAGCTGCACAATTGCCAGGTAGGACAGACAATGATATCAAGAACTATTGGAACACAAAGTTGAAGAAAAAACTCATGGCTTTACATCACCCTAGAAAACCTTCATTTCCACCCCCATCTTCTTTCTTTGACTACTTCACTCAAACTCCAACAACATCCTTCAATGATCTTCAAACCATCTCACTTCTTTCAAACAACTATCCAAACACATCTTTCAACCCTTTTTACCAAAACCAAGATTCCATGAACCCTCACATGCAATATAATAATACTTACCCTATTATCAAAGACAACAACAACAACATGTTTATGTTTGGAAGTGAAGGAAGTTGTAGTTCATCTGATGGAAGTTGCAAGGAAATCAAGCAAGAAGAAATTGGCTATCATCCTCATCATCATCACATGTCTAGTATTGGATTTGATGAGTTCAACAATAACAATAACTTCATGATAAGTTCTAACAATGGAAGTGTTGTTGGTCGTGAAACTTTGAACCAATATGAAGAAAAATCAAGTGGAGTTGGATATAGTTACAATAATAATACTATTAGTCCAAGTCAAACATTAACTCCATTACTAGATTATGGTCTTGAAGATATTAAGCATTTGATTAGTAACAACAACAACAACATCAACAAAGATTTTAATGTTGAGGAAGTTCATAAGAATGAAGAGAATAATGGTATGTACTATTACCATTACTAG 981 0.3527 MGRAPCCDKTSVKRGPWSPEEDSKLKDYIEKHGTGGNWISLPHKAGLKRCGKSCRLRWLNYLRPNIKHGDFSDEEDRIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMALHHPRKPSFPPPSSFFDYFTQTPTTSFNDLQTISLLSNNYPNTSFNPFYQNQDSMNPHMQYNNTYPIIKDNNNNMFMFGSEGSCSSSDGSCKEIKQEEIGYHPHHHHMSSIGFDEFNNNNNFMISSNNGSVVGRETLNQYEEKSSGVGYSYNNNTISPSQTLTPLLDYGLEDIKHLISNNNNNINKDFNVEEVHKNEENNGMYYYHY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02281 326 PANTHER OS09G0431300 PROTEIN 1 274 - -
Vivi5g02281 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Vivi5g02281 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Vivi5g02281 326 SMART sant 67 115 IPR001005 -
Vivi5g02281 326 SMART sant 13 64 IPR001005 -
Vivi5g02281 326 FunFam Transcription factor RAX3 7 68 - -
Vivi5g02281 326 Gene3D - 69 129 - -
Vivi5g02281 326 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Vivi5g02281 326 MobiDBLite consensus disorder prediction 1 21 - -
Vivi5g02281 326 CDD SANT 16 62 IPR001005 -
Vivi5g02281 326 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Vivi5g02281 326 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Vivi5g02281 326 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Vivi5g02281 326 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Vivi5g02281 326 Gene3D - 7 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02281 Vivi-Chr5 96180632 96182513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02281 1 119 MYB Transcription Factor Family AT5G57620 86.555 4.59e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi5g02281 Myb_DNA-binding 1.7e-14 CL0123