Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02248 ATGGAAAATCACAAGACACCCTTTTCCCTATCTCTTGATACCAAGAATGTTGTCATAGTTAAACCCTCCAAACCCACACCATCTGAAATTCTTTCACTCTCCACCATTGACAATGATCCTAACATCAACATTCTTTGTCAAACCATATATGTCTACAAAGCAAATGACAATTTCCCAAATGACCAAAAAGACCCTGCTTCTGTGATAAAAGAAGCTCTTTCAAAGACTTTGGTTTACTATTACCCTCTTGCAGGAAAAATAATAACACTTGATGATGATGAAAAACTTGGAATCAACTGTAATGGTGATGGAGTTCCATTCTTAGAAGCAAATGCAAACTGTGAACTCTCTTCCCTTAACTATCTTGAAGGCATTGATGTTCCAACAGCACAAAAGTTAGTGTTTGATAACCCTTCACAAGACCAAACTAGTCCTCATCCTTTGGTTTTCAAAGTTACAAAGTTTCTTTGTGGTGGTTTCACAATTGGTATGGGATTGTCTCATAGTGTTTGTGATGGTTTTGGTGCATCAAAATTCTATAGAGCACTTTCAGAATTTGCAAGTGGAAAAAATGAACCTTCTGTTAAACCTGTTTGGGAGAGAGACAGACTAACAGTGAAAAAAACTACTCTTAAGAAAGAAGAAGAACCATTTAAGTTTCTTGTAGATGAAACTTCATTAGCAACTTCACCTTTTTTACCAACCAAAGAAATCTCACATGAATGTTTTAACTTGAATATTGAAACTATAAAAAATCTCAAAATGAAACTAATGAAGGAAATTGATAGTGATAGTGATAATGTGATGAAGGAAAGTTTCACAATCACAACAGTTGAAGCACTTGGTGCTTATGTTTGGAGATCAAAAGTAAGAGCTTTGAAACTAAACAATGATGGAAGCACTTTGTTTTGTTTAGCAGTTGGTGTGAGAAACTTAATGGACCCACCTTTGCATGAAGGGTATTATGGTAATGCATTTGTAGCTTCAAATGTGGTGTTAAAAGTGAAAGAGCTTAATGAAAAACCACTTTTTGAAGCTGTGAAGCTTATCAAAGAGAATAAAAAGGCTTCAATGAATGAAGAACATATAAGAAATTCAATTAACATGTTGGAGATAATGAGGAGAAGGAAGATTAAGATTGAAGGAAGAGGTGCATCATTGGTTTTGACAGATTGGAGACAACTTGGTTTGTTGCAAGAAGTTGATTTTGGTTGGAAGGGTTCGGTTAATATTGTGCCTGTTCCTTGGAACATGTTTGGTTTTGTGGATTTGTGTCTCTTTTTGCCTCCAAATAATTTGGATCCTTTGATGAAAGGTGGAGTTAGGATCTTTGTGTCACTTCCTAAAGCTTCAATGGATAAGTTTAAGGAGGAGATGGAGCTTCTCAAGGGCATGAAAGTTGATGAAGATATATAG 1416 0.3545 MENHKTPFSLSLDTKNVVIVKPSKPTPSEILSLSTIDNDPNINILCQTIYVYKANDNFPNDQKDPASVIKEALSKTLVYYYPLAGKIITLDDDEKLGINCNGDGVPFLEANANCELSSLNYLEGIDVPTAQKLVFDNPSQDQTSPHPLVFKVTKFLCGGFTIGMGLSHSVCDGFGASKFYRALSEFASGKNEPSVKPVWERDRLTVKKTTLKKEEEPFKFLVDETSLATSPFLPTKEISHECFNLNIETIKNLKMKLMKEIDSDSDNVMKESFTITTVEALGAYVWRSKVRALKLNNDGSTLFCLAVGVRNLMDPPLHEGYYGNAFVASNVVLKVKELNEKPLFEAVKLIKENKKASMNEEHIRNSINMLEIMRRRKIKIEGRGASLVLTDWRQLGLLQEVDFGWKGSVNIVPVPWNMFGFVDLCLFLPPNNLDPLMKGGVRIFVSLPKASMDKFKEEMELLKGMKVDEDI 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02248 471 Gene3D - 233 459 IPR023213 -
Vivi5g02248 471 Gene3D - 9 217 IPR023213 -
Vivi5g02248 471 PANTHER ACYL TRANSFERASE 4 12 460 - -
Vivi5g02248 471 Pfam Transferase family 12 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02248 Vivi-Chr5 93612801 93614635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02248 10 457 Monolignol Biosynthesis Gene Families AT5G48930 27.623 1.86e-33 129