Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02239 ATGAGTTTTGAAGATTCTTTTTTTCTTTCTCTTCAATCTACCTTCACTTTCTTCTTCTTCTCTTTCACCTTTCTATTCTCAATCTTTTCTCTTCTCATTTTTATCTCTAGAATAAAACCATGGTGTAATTGCAACACTTGCAAAACTTACTTATCCATGACTTGGTCAAAAAACTTCATAAACCTTTGCGACTATTACACTCATCTTCTTCAAACTTCACCGACGGCAACAATCAATATCCATGTCTTAGGTAACACAATAACCGCAAACCCAGAAAATGTCGAATATATTCTCAAAACAAATTTCAACAACTACCCAAAAGGGAAACAATTCTCCGCAATTCTCGGCGATCTTCTCGGCCGTGGCATCTTCAACGTCGACGGTGATTCATGGAAGTTTCAACGCAAAATGGCGTCTCTTGAACTTGGCAGTGTGGCGATTCGTTCATACGCTATGGAACTTGTCGCAGAAGAAATCAAAACGAGGTTGATTCCTCTCATAGCTTCAAAGACTGATCAAAACAATGATGTCCATTTGGACATGCAAGATATTCTTAGAAGATTTTCTTTCGACAACATTTGCAAATTCTCATTTGGTTTAGACCCGTGTTGTCTTGTTCCATCACTTCCTGTTTCAAAGCTCGCTGACGCTTTTGATCTTTCGTCAAAGCTTTCGGCTCAAAGAGCAATGAGCGCGTCGCCGTTAATATGGAAGATGAAGCGTTTCTTCAACGTTGGGTCGGAGAAGAAGCTGAAGGAAGCTATTAAAGTTGTGAACGACATGGCAAAAGAGATGATAAAACAAAGACGAGAAATTGAAATTGGAATTGGAATTGGAGTTGACTCGCGAAAAGATCTTCTCTCACGTTTTATGGGTTCTTTGAATTCAAATGAAGATGAATATTTGAGAGATATAGTTGTTAGTTTTCTTTTGGCTGGTCGTGATACAGTTGCTTCTGCCTTAACCGGGTTTTTTATGTTATTGTCGAAGAACCCGGATGTTGAGGAGAAGATTCGGGTTGAACTAGACCGGATAATGAACCCGGTTCAGGAAGTTGCTACTTTTGAACAGACGCGAGAGATGCATTATGTTAATGCAGCTATTCATGAGAGTATGAGGCTTTTTCCACCGGTTCAGTTTGATTCAAAGTTTGCTTTGGAGGATGATGTCTTACCTGATGGAACTTTTATAAAGAAGGGAAGTCGGGTTACTTATCATCCATATGCAATGGGTCGGATGGAAACCATTTGGGGACCCGATTTTATGGAGTTTAAACCGGAAAGATGGTTGAGAGAAGGTGTGTTTGTACCAAAATGTCCTTTTAAGTTTCCAGTTTTTCAAGCAGGTTTGAGGGTTTGTTTGGGAAAGGAATTGGCTATAGTGGAAATGAAGTCTGTTGTTGCGGCTTTAGTAAGACGGTTTGATGTTCGGGTTGTTGGACCGAATCAGGAGCCACGGTTTGCACCGGGTCTAACTGCCACGTTTAGCGGTGGCTTGCCGGTTAAGTTTTATGAAAGAAGATGA 1524 0.4035 MSFEDSFFLSLQSTFTFFFFSFTFLFSIFSLLIFISRIKPWCNCNTCKTYLSMTWSKNFINLCDYYTHLLQTSPTATINIHVLGNTITANPENVEYILKTNFNNYPKGKQFSAILGDLLGRGIFNVDGDSWKFQRKMASLELGSVAIRSYAMELVAEEIKTRLIPLIASKTDQNNDVHLDMQDILRRFSFDNICKFSFGLDPCCLVPSLPVSKLADAFDLSSKLSAQRAMSASPLIWKMKRFFNVGSEKKLKEAIKVVNDMAKEMIKQRREIEIGIGIGVDSRKDLLSRFMGSLNSNEDEYLRDIVVSFLLAGRDTVASALTGFFMLLSKNPDVEEKIRVELDRIMNPVQEVATFEQTREMHYVNAAIHESMRLFPPVQFDSKFALEDDVLPDGTFIKKGSRVTYHPYAMGRMETIWGPDFMEFKPERWLREGVFVPKCPFKFPVFQAGLRVCLGKELAIVEMKSVVAALVRRFDVRVVGPNQEPRFAPGLTATFSGGLPVKFYERR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02239 507 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02239 507 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02239 507 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02239 507 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02239 507 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02239 507 SUPERFAMILY Cytochrome P450 60 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02239 507 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02239 507 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02239 507 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02239 507 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02239 507 Gene3D Cytochrome P450 49 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02239 507 PANTHER CYTOCHROME P450 32 500 - -
Vivi5g02239 507 Pfam Cytochrome P450 85 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02239 507 CDD CYP86A 77 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02239 Vivi-Chr5 92930152 92931838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02239 32 506 Cytochrome P450 AT2G27690 60.833 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02239 K20624 - gmx:100813091 726.472