Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02238 ATGAGTTTTGAAGATTCTCTTTCTCTTCAATCTACCGTCACTTTCCTCTTCTCCTCTTTCACCATCCTATATTCATTATTTTCTCTTCTCATCTACATCTCAAGAATAAAACCATGGTGTAACTGCAACACTTGCAAAACTTCCTTAACCATGAGCTGGTCAAAAAACTTCATAAACCTTTGCGACTACTACACTCATCTTCTTCAAACCTCACCCACAGGAACAATCAATGTCCACGTCTTAGATAACACCATAACTGCAAATCCAGAAAACGTTGAATACATCCTCAAAACAAATTTCAACAACTATCCTAAAGGGAAACAATTTTCCACACTTCTTGGCGATCTTCTTGGTCGTGGTATATTCAATGTCGACGGCGATTCATGGAAGTTTCAGCGGAAAATGGCGTCTCTTGAACTAGGCAGCATTGCAATTCATTCATATGCCATGAAACTTGTTACAGAAGAAATCAAAACTAGGCTTATTCCTCTCATAGCTTCAAAAACGGATCAGAGAGATGATGATTTTTTAGACATGCAAGATATTCTTAGAAGATTCTCGTTCGACAATATTTGTAAATTCTCATTTGGTTTAGACCCGTGTTGTCTTGTTCCATCACTTCCTGTTTCAAAGCTCGCCGACGCTTTTGATCTTTCATCAAAGTTTTCAGCTGAAAGAGCGACATACGCGTCACCGTTAATATGGAAGATGAAACGTTTCTTCAACGTTGGGTCGGAGAAGAAGCTGAAAAAAGCCATTAAAGTGGTGAACGACATGGCAAAAGAGATGATAAAACAAAGACGGGAAATTGCAATTGGAGTTGATTCGCGAAAAGATCTTCTCTCGCGTTTTATGAATACTTTGAATTCAAATGAAGACGAATATTTAAGAGATATAGTTGTTAGTTTTCTTTTGGCTGGTCGTGATACGGTTGCTTCTGCATTAACCGGGTTTTTTATTTTATTGTCTAAGAACCCGGATGTTGAGAAAAAGATTCGGGTTGAGTTAGACCGAATAATGACCGCGGATCAAGAAGTTGCTACTTTTGAACAGACGCGAGAGATGCATTATATAAATGCAGCAATCCATGAGAGTATGAGGTTTTTTCCACCGGTTCAGTTCGATTCAAAGTATGCTTTGGAAGATGATGTTTTACCGGATGGTACTTTTGTGAAGAAGGGAAGTCGGGTTACTTATCATCCATATGCGATGGGTCGGATGGAGACCATCTGGGGACCCGATTTGTTGGAATTTAAACCGGAGAGATGGTTGAGAGAAGGTGTGTTTGTACCAAAAAGTCCTTTTGAGTATCCAGTATTTCAAGCTGGTCTGAGAATTTGTTTGGGAAAGGAATTGGCTATTGTAGAGATGAAGTGTGTTGTTGCTGCTTTAGTAAGACGGTTTGATGTTCGGGTTGTTGGATCGAATCAGGAGCCACGATTTGCACCGGGTCTATCTACCACATTTAGAGATGGCTTACCGGTTAAGTTTTATGAAAGAACATGA 1506 0.3951 MSFEDSLSLQSTVTFLFSSFTILYSLFSLLIYISRIKPWCNCNTCKTSLTMSWSKNFINLCDYYTHLLQTSPTGTINVHVLDNTITANPENVEYILKTNFNNYPKGKQFSTLLGDLLGRGIFNVDGDSWKFQRKMASLELGSIAIHSYAMKLVTEEIKTRLIPLIASKTDQRDDDFLDMQDILRRFSFDNICKFSFGLDPCCLVPSLPVSKLADAFDLSSKFSAERATYASPLIWKMKRFFNVGSEKKLKKAIKVVNDMAKEMIKQRREIAIGVDSRKDLLSRFMNTLNSNEDEYLRDIVVSFLLAGRDTVASALTGFFILLSKNPDVEKKIRVELDRIMTADQEVATFEQTREMHYINAAIHESMRFFPPVQFDSKYALEDDVLPDGTFVKKGSRVTYHPYAMGRMETIWGPDLLEFKPERWLREGVFVPKSPFEYPVFQAGLRICLGKELAIVEMKCVVAALVRRFDVRVVGSNQEPRFAPGLSTTFRDGLPVKFYERT 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02238 501 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02238 501 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02238 501 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02238 501 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02238 501 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02238 501 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02238 501 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02238 501 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02238 501 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02238 501 Pfam Cytochrome P450 83 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02238 501 CDD CYP86A 85 493 - -
Vivi5g02238 501 SUPERFAMILY Cytochrome P450 59 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02238 501 Gene3D Cytochrome P450 49 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g02238 501 PANTHER CYTOCHROME P450 31 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02238 Vivi-Chr5 92863704 92865266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02238 30 501 Cytochrome P450 AT2G27690 58.700 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02238 K20624 - gmx:100813091 712.22