Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02231 ATGAGAACACTATACACTCAAGGAACAAACCTTATCAATTTACCATTTTGCCACTGTTCCCAATCCCTCTCTCCAAACCCAAATGTTTCATTCCTCGTTCCTTCCACGCATTCTAGGAATTCATCTCTAAAACCTTTTTCCATTTCCTTCAAAAACTCTCTCTTTTCTCCAATTCAAGCTTCTTCCATGGCTTCTTCCACTGTCACAGACGCAACACAGAAACCATTCTCTGTTCTCTTTGTGTGTCTTGGCAACATCTGTAGAAGCCCAGCTGCGGAAGGGGTTTTCACAGACTTGGTTAAGAAAAGGGGGTTTGATTCGAAGTTTAGAATTGATTCTGCTGGTACAATCAATTATCATGAGGGTAATGAAGCTGACCCGAGAATGAGAGCTGCATCAAAGAGACGTGGGATTGAGATAACTTCACGTTCAAGGCCAATTAAGTCATCTGATTTTGTTGAATTTGATATTATTCTTGCTATGGACAAGCAAAACAAAGAGGACATATTGGAAGCTTTTAATAGATGGAAATTTAGAGATCCTATACCTGATGATGCCCACAAAAAGGTTAAGTTGATGTGCTCATATTGTAAGAAGAACAGTGAAACTGAAGTCCCAGATCCTTACTATGGTGGACCTCAAGGCTTTGAGAAGGTGTTAGATTTGCTTGAAGATGCTTGTGAATCATTGTTGGATGACATTTTGGCAGAAAATAAACATATACAAGAATCCTAA 735 0.3918 MRTLYTQGTNLINLPFCHCSQSLSPNPNVSFLVPSTHSRNSSLKPFSISFKNSLFSPIQASSMASSTVTDATQKPFSVLFVCLGNICRSPAAEGVFTDLVKKRGFDSKFRIDSAGTINYHEGNEADPRMRAASKRRGIEITSRSRPIKSSDFVEFDIILAMDKQNKEDILEAFNRWKFRDPIPDDAHKKVKLMCSYCKKNSETEVPDPYYGGPQGFEKVLDLLEDACESLLDDILAENKHIQES 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02231 244 CDD LMWPTP 77 232 - -
Vivi5g02231 244 Pfam Low molecular weight phosphotyrosine protein phosphatase 78 231 IPR023485 -
Vivi5g02231 244 FunFam Low molecular weight protein-tyrosine-phosphatase 75 239 - -
Vivi5g02231 244 SMART LMWPc_2 76 233 IPR023485 -
Vivi5g02231 244 Gene3D - 72 243 - -
Vivi5g02231 244 PRINTS LMW phosphotyrosine protein phosphatase signature 78 95 IPR017867 GO:0004725|GO:0006470
Vivi5g02231 244 PRINTS LMW phosphotyrosine protein phosphatase signature 205 220 IPR017867 GO:0004725|GO:0006470
Vivi5g02231 244 PRINTS LMW phosphotyrosine protein phosphatase signature 121 137 IPR017867 GO:0004725|GO:0006470
Vivi5g02231 244 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 9 239 - -
Vivi5g02231 244 SUPERFAMILY Phosphotyrosine protein phosphatases I 74 234 IPR036196 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02231 14 238 Protein tyrosine phosphatase (PTP) family AT3G44620 57.977 2.90e-94 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02231 K25307 - gmx:100797254 343.969