Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02193 ATGAACCCCAACCACCATAATTCTTGGTCCAATTTCATGCAAAATTGTGGCATTCCACCAATTATCCCAAATCAACAAAATGCATCCAATAATCCAAACTCACATCATAACTCAAAATTTCAAAATCCTACTTTTATCCCAAATCAACAAAATTATCCACACTTTGGAAATTACCCATTTTATTATCAACACTTTCCATCTCAATCAAATAGTCCCACTATGTTTCATGGAGTTCAAATGGATAATAGTCATGTGGAAGCAAATGATCAAGAGCCTGAAACACCACAACTTTGTACTCAAGCTCAAGATGGGTTGGAAACAATCAACCTTGATGAAGAAGTCAAAACTACACCGGTTACGAATATGTTGAAAATAAGATTTCAACCAAAGGAGGATGAACTTCTCATTCAATCATGGCTCAATATTTCAAGGGATCCAATTGTTGGGATTGATCAAAAAGGAGATAGTTTCTGGAAGAGGATTGGTGAAGCTTATAACAACCACCGCCACAAGAATTGTCCAGAGAGGAATCCGATGGCACTAAAAGTTCGATGGCATAAAAAGATTAATCCTTGTGTACAAAAGTTTGTTGGGTGCTACAAACAAGCTGTCGCTGTAAAGAAAAGCGGTAGCTCTGAGAGTGACATCGTTTCGGCAGCATGCGATATTTATTATCAAGACGGTCATGAAAAGTTCACATTTCAGAGTGCATGGAAATTATTGAGAGATGAACCCAAATGGCTTGGAGGTTCATCAGAACCTTCTGCAAAAAGAACAAAGAGTTCGGATTCTGGAGCATATTCAACATCTTCTAACCCACCAACGCCAACAAGCGAATACAATCCACCATCGCCGACTTTGTTACATCGTCCAATCGGTAATAAGGCGGCCAAAAGGAAGCAAAAAGAAAAGTTTGTGGAAAAGCCTACTCCTAAATTTGATGCTATGAAAGAGGACTTAAAGAAAAAAATTGAATTAATGTCGGGGTTTGCACGTGATTATGCACGTATTGAGAGTGAAAAAATGGAGATAGAGAGGAAAAGGATTGATGCTGAGTTGCACGCGGCAAAGATTAATGATTTGCAAATACTCACGAAAGATACAACAAATATGACACAAAGACAACTACAAGATCATGAATTTTTGTGTGGCGTAATTAGAGATAGATATGGAATTAATTGA 1182 0.3773 MNPNHHNSWSNFMQNCGIPPIIPNQQNASNNPNSHHNSKFQNPTFIPNQQNYPHFGNYPFYYQHFPSQSNSPTMFHGVQMDNSHVEANDQEPETPQLCTQAQDGLETINLDEEVKTTPVTNMLKIRFQPKEDELLIQSWLNISRDPIVGIDQKGDSFWKRIGEAYNNHRHKNCPERNPMALKVRWHKKINPCVQKFVGCYKQAVAVKKSGSSESDIVSAACDIYYQDGHEKFTFQSAWKLLRDEPKWLGGSSEPSAKRTKSSDSGAYSTSSNPPTPTSEYNPPSPTLLHRPIGNKAAKRKQKEKFVEKPTPKFDAMKEDLKKKIELMSGFARDYARIESEKMEIERKRIDAELHAAKINDLQILTKDTTNMTQRQLQDHEFLCGVIRDRYGIN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02193 393 MobiDBLite consensus disorder prediction 254 275 - -
Vivi5g02193 393 Pfam No apical meristem-associated C-terminal domain 231 375 IPR029466 -
Vivi5g02193 393 PANTHER - 113 383 - -
Vivi5g02193 393 MobiDBLite consensus disorder prediction 17 46 - -
Vivi5g02193 393 MobiDBLite consensus disorder prediction 249 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02193 Vivi-Chr5 90954377 90955558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02193 126 303 Glutathione S-transferase Gene Family AT5G41240 37.173 9.40e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02193 - - vvo:131642220 456.447