Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02125 ATGTCTTCCAACAAGAAAAACATCATGAGAACAATTTTCACAACAAACGGAAGTTGTGGATCATGCGTAAAACCAAAAGCCATTCAAGTCCACGAACCAACCCTAAAACCAAAAACCTCCATCAACCATATCAAGATCACAAATCCAAGTAGCAAAACTTCTTCTACTACAACCTCCGGCGACCGAAACGGTGCCGTTTGCAGCGTCAACGACAGCGAAGAATTCTCAACCACCACGTTCTCAGAGGCCGATACAAATAACAACTACTCCGCACCCAAGCAGAGTCCGTTAATGAACACTGTGGCTGTCGAGAAGGACTCTGAAGATCCTTATCATGATTTCAAACACTCTATGCTTCAAATGATTTTTGAGAATGAGATCGATTCCGAAGACGATCTTCAAGATCTTCTCCGGTGTTTTCTTCATCTCAATGAATCATGTTATCATCGTGTGATTGCTAAAGTCTTCAATGAAATCTGTCATGAAGCTTTTCCTGATAAGGTTTGTAGTATTGCTACCAAATCTTTCGAATGA 534 0.4101 MSSNKKNIMRTIFTTNGSCGSCVKPKAIQVHEPTLKPKTSINHIKITNPSSKTSSTTTSGDRNGAVCSVNDSEEFSTTTFSEADTNNNYSAPKQSPLMNTVAVEKDSEDPYHDFKHSMLQMIFENEIDSEDDLQDLLRCFLHLNESCYHRVIAKVFNEICHEAFPDKVCSIATKSFE 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02125 177 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 54 163 IPR038933 GO:0045892
Vivi5g02125 177 ProSiteProfiles OVATE domain profile. 103 162 IPR006458 -
Vivi5g02125 177 MobiDBLite consensus disorder prediction 45 64 - -
Vivi5g02125 177 Pfam Transcriptional repressor, ovate 107 162 IPR006458 -
Vivi5g02125 177 NCBIfam uncharacterized plant-specific domain TIGR01568 101 161 IPR006458 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi5g02125 Ovate 2.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02125 - - mtr:11445731 275.789