Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02108 ATGAACAACAACAACAATTCTTCATCCCTTTCTCATCATCGTAACCCCAAAAACAACAATCATCATCATCATGATCAATGTCACAAACCCACTGTTCACAAATGTGAGTTTTGTCACAAAGTATTCCCCACTGGTCAAGCACTCAGCGGTCACAAGACCTGTCATCGTTCCAACAAACAGATACATGATGATCATGTTAATAAGGTTTATAAAACTATGAAGGTCACTTTCTCTTTATCTTGTTCTCCAAGTAATCATAATAGTGATGTTGATGCCAAACAGAAAAGGCATTCATGGACTAGGGTTTTCAAGACTACCGTTCATCATCCACCTACTGCATCAACCTTGAAACCTAGCCAACAAGAAGAATTACCAGCTGTTGACTTGCTAAGTTTTCTGCCACCAAGGTTGTATAATACCAAGAAAAGGAGCAGGAGATATCTTGTTCATGATGGAGTCGCTAATAATACTGCTCCAATATTGCCGCTGTTGGATATGTCTTGCGAATCGATTCCAAATCTTGATTTGAATCATCGTGAGTATAAAAGGATGAAACTCTCAATCAATGGGAATGATACTGAGATGATGCAGAAACAAGATTTGTTGCCAACAAGTGGTCGTATTGATGAAACGGTGGTGAACATGAGTGAATGTGAAATAAATATAGAATCACTTCATGAATTGGGGTCAAGAGTTATTCGAAACTTTGATTTGAACGATCTCCCGACTAATGATGTTGAAACTGTGGTGTCAAGAGTTGTTCGAAACTTTGATTTGAACGACCTCCCTCGCTTTCCTTTGATTCTGGGATTAGTTATTAAAGATATACTTCACTTGAAAAATGAATGA 849 0.3793 MNNNNNSSSLSHHRNPKNNNHHHHDQCHKPTVHKCEFCHKVFPTGQALSGHKTCHRSNKQIHDDHVNKVYKTMKVTFSLSCSPSNHNSDVDAKQKRHSWTRVFKTTVHHPPTASTLKPSQQEELPAVDLLSFLPPRLYNTKKRSRRYLVHDGVANNTAPILPLLDMSCESIPNLDLNHREYKRMKLSINGNDTEMMQKQDLLPTSGRIDETVVNMSECEINIESLHELGSRVIRNFDLNDLPTNDVETVVSRVVRNFDLNDLPRFPLILGLVIKDILHLKNE 282
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02108 282 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Vivi5g02108 282 Pfam C2H2-type zinc finger 32 57 - -
Vivi5g02108 282 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
Vivi5g02108 282 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 18 246 IPR044653 GO:0003700
Vivi5g02108 282 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi5g02108 Vivi-Chr5 86679199 86680047 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02108 32 55 C2H2 Transcription Factor Family AT3G19580 75.000 1.33e-07 50.1