Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02105 ATGAACAACAACAACAATTCTTCATCCCTTTCTCATCATCGTAACCCCAAAAACAACAATCATCATCATCATGATCAATGTCACAAACCCACTGTTCACAAATGTGAGTTTTGTCACAAAGTATTCCCCACTGGTCAAGCACTCGGCGGTCACAAGACCTGTCATCGTTCCAACAAACAGATACATGATGATCATGTTAATAAGGTTTATAAAACTATGAAGGTCACTTTCTCTTTATCTTGTTCTCCAAGTAATCATAATAGTGATGTTGATGCCAAACAGAAAAGGCATTCATGGACTAGGGTTTTCAAGACTACCGTTCATCATCCACCTACTGCATCAACCTTGAAACCTAGCCAACAAGAAGAATTACCAGCTGTTGACTTGTTAAGTTTTCTGCCACCAAGGTTGTATAATACCAAGAAAAGGAGCAGGAGATATCTTGTTCATGATGGACTCGCTAATAATACTGCTCCAATATTGCCGCTGTTGGAGATGTCTTGCGAATCGATTCCAAATCTTGATTTGAATCATCGTGAGTATAAAAGGATGAAACTCTCAATCAATGGGAATGATACTGAGATGATGCAGAAACAAGATGTGTTGCCAACAAGTGGTCGTATTGATGAAACAGTGGTGAACATGAGTGAAGGTGAAATAAATATAGAATCACTTCATGAATTGGGGTCAAGAGTTATTCGAAACTTTGATTTGAACGATCTCCCGACTAATGATGTTGAAACTGTGGTGTCAAGAGTTGTTCGAAACTTTGATTTGAACGACCTCCCGGCTAATGATGTTGAAATAGAATGA 813 0.3862 MNNNNNSSSLSHHRNPKNNNHHHHDQCHKPTVHKCEFCHKVFPTGQALGGHKTCHRSNKQIHDDHVNKVYKTMKVTFSLSCSPSNHNSDVDAKQKRHSWTRVFKTTVHHPPTASTLKPSQQEELPAVDLLSFLPPRLYNTKKRSRRYLVHDGLANNTAPILPLLEMSCESIPNLDLNHREYKRMKLSINGNDTEMMQKQDVLPTSGRIDETVVNMSEGEINIESLHELGSRVIRNFDLNDLPTNDVETVVSRVVRNFDLNDLPANDVEIE 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02105 270 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Vivi5g02105 270 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
Vivi5g02105 270 Pfam C2H2-type zinc finger 32 57 - -
Vivi5g02105 270 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 18 246 IPR044653 GO:0003700
Vivi5g02105 270 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02105 Vivi-Chr5 86567494 86568306 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02105 32 55 C2H2 Transcription Factor Family AT3G19580 79.167 1.37e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02105 - - vvo:131625941 473.781