Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02094 ATGGAATCTAAGATGGATCAGTATGAGATCATGGAACAGATCGGTCGTGGAGCTTTTGGTGCTGCTATTCTTGTTAATCACAAGGCTGAGAAAAAGAAATATGTGTTGAAAAAAATCAGGCTTGCTAGGCAGACTGAAAGATGCAGAAGATCTGCTCATCAAGAGATGGCTCTTATTGCAAGAATCAAGCATCCTTACATTGTCGAATTCAAGGAGGCTTGGGTTGAGAAGGGTTGCTATGTCTGCATTGTCACTGGATACTGTGAAGGTGGAGACATGGCTGAACTAATGAAAAAATTGAACGGTGCTTACTTTCCCGAGGAGAAACTCTGCAAATGGTTCACTCAATTACTTTTGGCAGTGGAATACCTTCATTCAAATTATGTTTTGCATCGCGATCTAAAGTGTTCCAACATCTTTCTTACCAAGGATCATGATATCCGCCTCGGAGATTTCGGGCTTGCTAAGACACTAAAAGCAGATGATTTGGCTTCTTCGGTGGTAGGAACTCCAAACTACATGTGTCCTGAACTTCTTGCAGATATTCCGTATGGATTCAAATCTGATATTTGGTCATTAGGCTGCTGTGTATATGAGATGGCTGCTCATCGCCCTGCCTTTAAAGCTTTTGATATGGCAGGATTGATAAGCAAGATAAACCGTTCCTCTATCGGGCCGTTGCCTCCGTGTTATTCCCCTTCATTGAAAATACTAATAAAAGGCATGTTGAGAAAAAGCCCCGAGCATCGACCAACGGCATCTGAGGTGTTGAAGCATCCTTATTTGCAACCTTACGTTGATCAGTATCGTCCGTCTTTCGCTCCTCTAACAGCCTTTTCTCCTGAAAAACCAATTTCTTCCGTCAATGATACCAAAAAACATATGGCCGAAAGTCAGAACAGTACCAGTTCAAGTAGTGACAAAGATAGTTTAATGTCAATTGAGAGAAACATTGCAACGACAATGGCGACAACGCCAACGAGTGATAGCAAAGCCACTGAGATAGATGTTGCATTAATCAATGATGATGGCTCAGAGCAAGAGGCGATAAAATCATCTCACAACGAACAGTGTTCTAATGTTGAATCTAAACAGCCAAAAACAATCAGAAATATAATGATGGCATTGAAGGAAGGGAGAGGTAGGGACGCAACTTCTCCGATGAGGGGAAGTCGTGTTAAGGCCGTTGGAGTATCGGCGCAGAAAGTAAATACAGAAGTATTGTCTAAATTGCCTAAACCTACTATCATTTCTCCTGGTTTGAAGGCTAATTTAGAGTCACCGGGTGTTCCACTTGTAAAGGCAACCCCAGATTCCGCAAAACGAATACAAGGATCATATCATTCAAAGCTCCAGTTACTAATGACAGAGCCGTCACCGAAAGTTAAACCGAAACTTGATACGACTCCACTATCTGGTTTTATAAAACAAGTTGAAGGAGATGGAGTTCCTCCGAGGCCAAGGCAAAGAACTCCTCCAAGCTTACTTCGACGACCTTCTTTTGCGGGACGGATGAGGCTGGCAGGAGTTGATAATCCAAATGCAGTGAACGATAGCGGGAAGCCAGGTCCAAGTAATTCAGGCCAGGAATCCGAGATGAACCAATGCCAGATGTTCAACGGTGTTCCACGGATTTCTAGACAGATTTCTAGAGAACCTCAGAAGGCTTTTGAAAGAAGTTCTAAAGGATTGCAAACAGACAGTAGTAATTCTGCCTCATCATCGGTTTCGATTCAAGGATGTGAACTTGCTGACGATGCAACAACTTTTATTGACATGCGAGAACATATACTTCCCAATCATAACAATGCAACAAACATTGAATCACGTCCAGACAGCAGCCAGTCGACAACGTGTTCGCATTGTAAGATGGCTGAAGAAATGTCCGAGGATTCCAATGAAGCCACCCTGAATTTTCAGAATACTATCATTAGTAATGAAAAAGTGAGTTCCAATTTAACTCTTGATGATCTTCCTGTTGAGAATTCTAAGAAAATGTTTGCCTTGGAAGATAGTCTTCCGAAAAATCAGACAACTAGATCCGTTGGTACACCTGCTGAAGCGGCAGAAGAAATCGAAGATCTTCAAGATATTTCTAAGGAAATGGCTTTAACCAAGTCTCTCCAAAATCCACCCTCAATCTCCGGAGAAAAATCTGTTTGTGATGAATTTGGTTCGGTAAACAATCTCAATAATAGACCTGAAACTGTCACTGGTGATGACAAATTCACGGTGAAGGATCGATTGTCGTTGGTCACTGAAACAGCTCCTGTAATTACTGCTACTAAATTATCTAGCCAAGAAAGGCCAGATACTAGTCATCTTCCTGCAGCGTTTGACGATATCATCCATGTTATTCGCCATAGTAGTTACCGTGTTGGGAGTGATCAACCGGTAAAAGAATCAGTGGAAATGGGAGTTCAGAATGTCGACGTTGGCAAGTTCATCAATGCTATGAGAGATGACATAGAAATGAGAAACGTAACCTCTCCCATGACTCTTAAATCTTCAACTTCCTCTGAATCTGCTACCTTGAAATCAAACATTTCCGATCAGTTTGAAATGAGAAATGCAAGCACAAGTTTCTCCGACGCCGAGAGCTTGAAATCGAGTGTCTCCGATCATCCTAGCCTTAAGGAACAAGAAGTGAACAACGCTGCTTCTTTAGTTTCAGAATCCGATTCAGCTGAGCATAGTAAATGCAACACTCCTACAACCACCGAAGACAAACCAGAAGGCAAACCACTAGCGAAGGAAATACTTGACGTGAAATCTTTTCAGCAGAGAGCAGAAGCGCTCGAAGAGCTCTTGGAATTGTCTGCAGACTTGTTGCAGCAGAACAGATTGGAGGAACTTCAAGTTGTTCTAAAGCCATTCGGCAAAGACAAGGTCTCGCCAAGGGAGACAGCGATTTGGTTAGCCAGGAGTCTTAAGGGAATGATGTCGGACGAAAACGGAAGACGTTCGTCATGA 2973 0.4255 MESKMDQYEIMEQIGRGAFGAAILVNHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIKHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKLNGAYFPEEKLCKWFTQLLLAVEYLHSNYVLHRDLKCSNIFLTKDHDIRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCVYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKILIKGMLRKSPEHRPTASEVLKHPYLQPYVDQYRPSFAPLTAFSPEKPISSVNDTKKHMAESQNSTSSSSDKDSLMSIERNIATTMATTPTSDSKATEIDVALINDDGSEQEAIKSSHNEQCSNVESKQPKTIRNIMMALKEGRGRDATSPMRGSRVKAVGVSAQKVNTEVLSKLPKPTIISPGLKANLESPGVPLVKATPDSAKRIQGSYHSKLQLLMTEPSPKVKPKLDTTPLSGFIKQVEGDGVPPRPRQRTPPSLLRRPSFAGRMRLAGVDNPNAVNDSGKPGPSNSGQESEMNQCQMFNGVPRISRQISREPQKAFERSSKGLQTDSSNSASSSVSIQGCELADDATTFIDMREHILPNHNNATNIESRPDSSQSTTCSHCKMAEEMSEDSNEATLNFQNTIISNEKVSSNLTLDDLPVENSKKMFALEDSLPKNQTTRSVGTPAEAAEEIEDLQDISKEMALTKSLQNPPSISGEKSVCDEFGSVNNLNNRPETVTGDDKFTVKDRLSLVTETAPVITATKLSSQERPDTSHLPAAFDDIIHVIRHSSYRVGSDQPVKESVEMGVQNVDVGKFINAMRDDIEMRNVTSPMTLKSSTSSESATLKSNISDQFEMRNASTSFSDAESLKSSVSDHPSLKEQEVNNAASLVSESDSAEHSKCNTPTTTEDKPEGKPLAKEILDVKSFQQRAEALEELLELSADLLQQNRLEELQVVLKPFGKDKVSPRETAIWLARSLKGMMSDENGRRSS 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02094 990 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Vivi5g02094 990 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Vivi5g02094 990 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g02094 990 SUPERFAMILY Protein kinase-like (PK-like) 5 321 IPR011009 -
Vivi5g02094 990 MobiDBLite consensus disorder prediction 861 914 - -
Vivi5g02094 990 MobiDBLite consensus disorder prediction 284 310 - -
Vivi5g02094 990 MobiDBLite consensus disorder prediction 551 578 - -
Vivi5g02094 990 Coils Coil 916 936 - -
Vivi5g02094 990 FunFam Serine/threonine-protein kinase Nek2 5 87 - -
Vivi5g02094 990 MobiDBLite consensus disorder prediction 559 578 - -
Vivi5g02094 990 FunFam Serine/threonine-protein kinase Nek5 90 338 - -
Vivi5g02094 990 MobiDBLite consensus disorder prediction 829 849 - -
Vivi5g02094 990 MobiDBLite consensus disorder prediction 475 532 - -
Vivi5g02094 990 MobiDBLite consensus disorder prediction 828 849 - -
Vivi5g02094 990 CDD STKc_Nek 7 262 - -
Vivi5g02094 990 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 938 - -
Vivi5g02094 990 MobiDBLite consensus disorder prediction 518 532 - -
Vivi5g02094 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Vivi5g02094 990 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g02094 990 Gene3D Transferase(Phosphotransferase) domain 1 90 338 - -
Vivi5g02094 990 MobiDBLite consensus disorder prediction 861 902 - -
Vivi5g02094 990 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02094 Vivi-Chr5 85630193 85635676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02094 12 273 MAP Kinase Kinase Kinase AT3G06030 32.374 2.00e-35 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Vivi5g02094 Pkinase 2.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02094 K08857 - gmx:100818747 1390.17