Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02058 ATGTTCTTTACAAATCTGCTGCTGCTAAAGGAGCTGCTGGATGTTGGGTTTTATAGTTATTCATGTGGTATGGCTGAGTTCATGGTAAAAGATGAGGTCAGAAAAAGTTTCTATAAGAATCCTGGAATTGCTGCTGGACTTGTAAGAATGCATTTTCATGATTCCTTTATCAGAGGGTGTGATGCGTCGGTACTTCTTGATTCGACTTCCTCAAACACTACAGAGACAGACTCTCCAGCCAATAAACCGATTCTTAGAGGGTTTGAAGTTATTGATAATGCCAAAGCTAAACTTGAAGAAGCATGCAAAGGAATTGTTTCATGCGCCGACATAGTTGCATTTGCAGCAAGAGACAGTGTAGAGTTGGCTGGAGGACTTGGCTATGATGTTCCTGCAGGAAGAAGAGATGGAAAAATATCACTAGCTTCTGATACAGATCAGATTTACCTCCTCCAACTTTCAATGTTAACCAACTCACTCAACTCTTTGCAACACACATTATTTATGGTAAGTTAA 516 0.3992 MFFTNLLLLKELLDVGFYSYSCGMAEFMVKDEVRKSFYKNPGIAAGLVRMHFHDSFIRGCDASVLLDSTSSNTTETDSPANKPILRGFEVIDNAKAKLEEACKGIVSCADIVAFAARDSVELAGGLGYDVPAGRRDGKISLASDTDQIYLLQLSMLTNSLNSLQHTLFMVS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02058 171 PRINTS Plant peroxidase signature 22 41 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g02058 171 PRINTS Plant peroxidase signature 86 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g02058 171 PRINTS Plant peroxidase signature 124 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g02058 171 PRINTS Plant peroxidase signature 46 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g02058 171 PRINTS Plant peroxidase signature 105 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g02058 171 PRINTS Haem peroxidase superfamily signature 44 58 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi5g02058 171 PRINTS Haem peroxidase superfamily signature 124 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi5g02058 171 PRINTS Haem peroxidase superfamily signature 106 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi5g02058 171 FunFam Peroxidase 16 159 - -
Vivi5g02058 171 Gene3D - 13 167 - -
Vivi5g02058 171 SUPERFAMILY Heme-dependent peroxidases 13 147 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi5g02058 171 ProSiteProfiles Plant heme peroxidase family profile. 12 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi5g02058 171 PANTHER PEROXIDASE 25-RELATED 9 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g02058 171 Pfam Peroxidase 29 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi5g02058 171 ProSitePatterns Peroxidases active site signature. 44 55 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02058 Vivi-Chr5 83572173 83575049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02058 13 145 Peroxidase AT4G33420 58.647 7.22e-48 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02058 K00430 - gmx:100779031 215.312