Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02040 ATGGGGTTTTTGTTGAAAGAAGGTTTGAAGAGTCTTTGTGGTAGGAATCAGTGGGCTTATGCTGTTTTCTGGAAGATCGGTTGCAATAATTCCAAGCTGTTAATCTGGGAAGATTGCTACTATGAACCATTGCCATCTCGTTTCCTTCCACAAATCGCTGGAACGTCTAATTCGCCTTACCAAGATAGGGAAGGATGCTGGTTTTCTTCTGATTCTCAGCGAAGGGCTCAAGAGGATGACAGAGTCTGTTCATTGATTAACAAGATGATGGTTAATAATTCTGTCAATGTTGCTGGTCAAGGGATACTTGGACGGGCGGCGTTCACCGGAAATCATCAGTGGATTGTTTTGAACAATTTCATCAAAGATGCATATCCACCAGAGGTATTAACCGAGTTGCATGGCCAATTTTCAGCTGGAATGCAGACAGTGGCGGTTATTCCTGTGCTTCCTCATGGTGTTGTTCAACTCGGTTCTTTCTTGCCGATAATGGAGAATATCGGATTTGTGAATGACGTGAAGAACTTGATCTTTCAATTGGGACATGTTCCCGGCGCGCTTCTATCCGAAGACTATTCAACAAGACTTTCTAATGAAAGGCATACTGGACCTGTGACTAATTCTATGCCGTTTTCTTTCGATCCACAAGTCACTACCTCAAACTGCACTCCCTCGGTAGCTAACGGTTCTAACCAACCGAGTAATTCACCGCATGGTCCAATGCATGTTGCTGCTCAAGCCCCTTTTCAAACGGGAGTAATAAATAGTTACCACAACGGTTCTGTATTGACACCTCAATCCCAAAACCTAAACCAGATATTTGAAAGCCTTTGCCAACCAAAGGCTCAACGAGAGAATGCAATTGTGAAGGCTGAAGCTGAAGTGATATCTACAAATCTCGATTCTTCATGTCTGCAACAACGTTCCTTTTCATATAATGCAAGGTCCACACTCCATATGGAACAACAAGTCTTATCAGGTGTCGGGTCACAAAGTCATGGTAACGCCAATATGAATCCATCATCAAGTGCCTATATGCCTCGACAGCAAACAAATGGAGGCCAAATTTATTATCAGAATTCTAACAACACTTCACTTCTTGGAGGAATCCCAATATGTAGTAGTGGGATGAGTAATAATAATCTTATAAGGAAAAATATGATTAATTGCTCGGTTTCTAATCCTCCAAAGTTATCCACTACTGATTTTTCCGGAACACAAAAAGTAGGGTTTGGAATTCAAAATGTTAATTCAACTACAGCTGCCAATCAGACGCATCTAAAAGGCTCGGAACAAAAAAATCTTCCCATTGATTTAAAGTATGCTCAAAATGCTCCGGCTTCCAGTGATGTAAGGATTGATGATTTGATTCAGGCTATGAAAATCCCGTCATCTTTTAATCTTAAGGAGCATGTGCCAGTGAATGATCACATCCCTGGTTTTCTTCATGATTTGGAACTTGAAGAAGCGTGTACGCAACTTTCATCGGGTGATGACGACTTGTTTGATGTACTAGGCATGGATTTCAAAAGGAATCTGCTGAATGGAAACTGGAATACGTTGTTTGCTGATGAATCAGATGCCAATGCAGAAAATCTTGATAAAAAAGCAATATCTACAAATTTTCCGGTTGTAGGTGATAATATTTATCCAGTTAATGAAGCGATATTAGACAATGGCATCTTCTCTGGAACAAACACTGGCCATCTCTTAGATGCCGTCGTCTCAAAAACTCAACCTGCTTCAAATGAGAATTCCGACGAAATGTCTTGCAGGACTACCATAACAAGGATTAGTACCGCGTCTGTTCCTTCTCCTACCGGCATTCAGATTATTCGCGATCGTGTTGGCCAGGGGGCGCTGTTTGATTTTCCCAAAGCAGAGATTAAAACTAGTGCAGCGGAAACAAGTTCTCTTAGGTCTGGTTGCAGCAAAGATAATGTTGGAAACTGTTCTCAAACCACTTCCATATACGGTTCTCAACTTAGTTCATGGGTGGAAAACGGTAGCAGCAGCCATGTGAAACACGAGAATAGTGTTTCAACCGGATACTCTAAGAGACCAGATGAAGTTAGCAAACCAAATCGTAAAAGGCTTAAACCTGGAGAGAACCCTAGGCCTCGACCTAAAGATCGCCAAATGATTCAAGATCGGGTGAAAGAATTACGTGAAATCGTGCCTAATGGAGCAAAATGTAGCATCGATGCTCTTCTTGAAAGGACCATCAAACATATGCTTTTCTTGCAAAGTGTAACAAAGCATGCTGATAAGCTGAAACAGACAGGAGAATCCAAGATTCTTAGTAAAGAAGGTGGATTGTTATTGAAAGATAACTTCGAGGGAGGGGCTACATGGGCGTATGAGGTTGGTTCACAATCAATGGTTTGCCCTATCATAGTCGAGGATCTTAATCATCCCCGTCAGATGCTCGTCGAGATGCTTTGCGAGGAACGAGGCCTCTTTCTTGAAATAGCCGATTTAATCAAAGGATTAGGATTAACTATCCTGAAGGGTGTCATGGAAGCTCGCAACGGCAAGATTTGGGCACGCTTTTCTGTCGAGGCAAACAGGGATGTAACAAGGATGGAAATATTCATGTCACTAGTTCGACTTTTGGAACAAACAGCAAAAGGAGGCGCATCTTCCTCAAACGCTGCAGGTGATAACAACATGATGGTTTATCATTCGATCCCGCAATCCACCTAG 2706 0.4205 MGFLLKEGLKSLCGRNQWAYAVFWKIGCNNSKLLIWEDCYYEPLPSRFLPQIAGTSNSPYQDREGCWFSSDSQRRAQEDDRVCSLINKMMVNNSVNVAGQGILGRAAFTGNHQWIVLNNFIKDAYPPEVLTELHGQFSAGMQTVAVIPVLPHGVVQLGSFLPIMENIGFVNDVKNLIFQLGHVPGALLSEDYSTRLSNERHTGPVTNSMPFSFDPQVTTSNCTPSVANGSNQPSNSPHGPMHVAAQAPFQTGVINSYHNGSVLTPQSQNLNQIFESLCQPKAQRENAIVKAEAEVISTNLDSSCLQQRSFSYNARSTLHMEQQVLSGVGSQSHGNANMNPSSSAYMPRQQTNGGQIYYQNSNNTSLLGGIPICSSGMSNNNLIRKNMINCSVSNPPKLSTTDFSGTQKVGFGIQNVNSTTAANQTHLKGSEQKNLPIDLKYAQNAPASSDVRIDDLIQAMKIPSSFNLKEHVPVNDHIPGFLHDLELEEACTQLSSGDDDLFDVLGMDFKRNLLNGNWNTLFADESDANAENLDKKAISTNFPVVGDNIYPVNEAILDNGIFSGTNTGHLLDAVVSKTQPASNENSDEMSCRTTITRISTASVPSPTGIQIIRDRVGQGALFDFPKAEIKTSAAETSSLRSGCSKDNVGNCSQTTSIYGSQLSSWVENGSSSHVKHENSVSTGYSKRPDEVSKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKILSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNHPRQMLVEMLCEERGLFLEIADLIKGLGLTILKGVMEARNGKIWARFSVEANRDVTRMEIFMSLVRLLEQTAKGGASSSNAAGDNNMMVYHSIPQST 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02040 901 MobiDBLite consensus disorder prediction 669 688 - -
Vivi5g02040 901 MobiDBLite consensus disorder prediction 689 714 - -
Vivi5g02040 901 CDD bHLH_AtLHW_like 703 772 - -
Vivi5g02040 901 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
Vivi5g02040 901 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 699 748 IPR011598 GO:0046983
Vivi5g02040 901 MobiDBLite consensus disorder prediction 669 714 - -
Vivi5g02040 901 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 899 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02040 Vivi-Chr5 82516070 82521252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02040 488 882 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 51.980 5.94e-113 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02040 - - aprc:113857443 1210.28