Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01957 ATGGGTGTGATTAAATCAGCTATATCAGATGCAATTCTAACATCAATATTCGTTTTCTTCATCTCAACACTAAGAATTCTCACTTCAAAAACAGCTTTTCTTCTCAATCTGGAACCAGTTTCACTACCAGGCCTATTCATCACAACCATCCTAAACACAATAATCATCCTCACAATAACCCTAATAGGAAGAATCTTAGGAGGTGCTAGCTTCAACCCTTCCTCAACAATTTCCTTCTACACATTAGGACTAAGACCCGATTCATCTCTCCTATCAATGTCCATTAGATTTCCAGCTCAAGCAATCGGCGGAGCTATCGGTATCAAAGCAATCCTTCATGTCATACCAAGTGAGTATCTACACATGGTGAAAGGTCCTTCTTTGAAAGTTGATATTCATACAGGAGCTATAGCTGAAGGAGTTTTGAGTTTTACTCATAACTTCGTTATTATACTAGTTATGCTTAGGGGTCCTAAGAATCCTTGGTTGAAGGTTTATTTGCTTTCTGTTACAACTTTGGTTTTGGTTGTTTTGGGTTCTGGTTATACAGGACCTTCTTTGAACCCTGCTAATGCTTTTGGTTGGGCTTATGTGAATGATAAGCATAATACTTTGGAGCAGTTTTATGTGTTTTGGATATGTCCTTTGATTGGAGCTTCTCTTGCTGCTTTGGTTTATCGATTTGCGTTTATGTCACCAGTTAAGGAGAAGAAGGCTTGA 720 0.3833 MGVIKSAISDAILTSIFVFFISTLRILTSKTAFLLNLEPVSLPGLFITTILNTIIILTITLIGRILGGASFNPSSTISFYTLGLRPDSSLLSMSIRFPAQAIGGAIGIKAILHVIPSEYLHMVKGPSLKVDIHTGAIAEGVLSFTHNFVIILVMLRGPKNPWLKVYLLSVTTLVLVVLGSGYTGPSLNPANAFGWAYVNDKHNTLEQFYVFWICPLIGASLAALVYRFAFMSPVKEKKA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01957 239 Pfam Major intrinsic protein 4 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g01957 239 Gene3D Glycerol uptake facilitator protein. 2 238 IPR023271 -
Vivi5g01957 239 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g01957 239 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g01957 239 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g01957 239 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g01957 239 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g01957 239 PANTHER AQUAPORIN SIP1-1 1 238 IPR044222 GO:0015250
Vivi5g01957 239 SUPERFAMILY Aquaporin-like 4 233 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01957 Vivi-Chr5 75319224 75320269 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01957 1 227 Major Intrinsic Protein MIP AT3G04090 45.374 3.28e-57 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01957 K09875 - gmx:100797126 303.908