Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01860 ATGGCGGGTACTATGAGAGAAACACCACTCGTCTCAGCTTCTGTGGAGGCGTTGTTACAAAAGCTTGTTTCTGCCGACTTCCCGAGCACGAAGGTTCACGTTCCACTCTTGATAAACCTGAAGAAAACCCTCACGAAGATTCAACCTGTACTTGATCATTATGCCGTGAACACCAAATGGCTGGATCTGCTGATAGATGTTGTACACGAAGTTGACAGATTGTTTGACCAAATCAGCATCGAACTGGAACCTCACTATCAAACCCTAACTCCTACTACTAAGGTGCATAACATTTTTCATTCTCGTTTCAAGCAGATTCATGATGTCATCAATTCTAAAATCCAGAAGTTAACTGGAAGATTAGAATGCTTGATTTTAGGTGAATTAGGGTTTTCGGATTACAGCAATGTTTCTTATGGAACTCCCTCAAGTTCTATTTTAGATGATGAATCTTCTATTTATGGGCGAGGCATGGATAAAGAAAAACTCAAACATCTTTTGTTATCTAATGATGGTGGTGGTAATGGTAAAATGGGAATTATTTCCATTGTCGGTATGGGAGGGATTGGGAAAACAACCCTTGCTAAACTCCTTTACAATGATCCGCAAGTTAAGGAGAATTTTGAGTTAAAAGTGTGGGCATATATCTCAAAAGATTTCGATGCTGTTAGAATTTTTGAAACCATTCTTGAATCTATCGCATCACAGTCAATTGGTAATGATAACCTCAGCTCTCTAATTCTTGAATCTCACAATGCAAAAGGAGATGACACTATTTACCAGAATCTTCTATTATTGTCATTGCAACAAATTTTAAATACTTCCAAATTTTTGCTAGTGCTAGATGATGTGTGGGATACAAAATCTGTTGATTGGATACGTTTGATGGACACCTTTAATGCTGGGGAAATGGGAAGTAAAATCATCATCACAACTCGGGATGAAAGAGTTGCAAGATCCATGCAAACGATTCCCTCTGTCTACTATTTGAGGCCTCTGGAAAGTGAAGATTGCTGGTCTTTATTTGCCAGATATGCATTTGGAACATATCACGGCCAACAACGATCCTATCTAGAGAAAATTGGTAGGAAAATTGCAAAAAAATGTGATGGATTACCATTAGCTGCAATAGAATTTGGGGCTATTCTTTATGGCAAATTGTCCCTAGATGATTGGGATTGTGTGCTAGAAAGTAACATTTGGGAATCGACAAATCCCAAGGTGCACGCTGCTCTAGAATCAAGTTACCATTTTCTTTTGCCTCCTATAAAACGATGTTTCGCATATTGCTCTATTTTCCCAAAGAAGTACATCTTAGAAAAGAAAATGGTAGTTCAGTTGTGGATTGCAGAAGACTTGGTAGATTCGTTCGCTGGTCAGGAAAGTTGGAAAGTTGGAGAAGAATACTTTGATGTACTAGTGTCAAAATCTTTGATACAACGGCGGTCTACCGAGGACAAAGAAGCAAACTTTGAAATGCATAACCTTGTCCATGATTTAGCCACGATGGTTTCATCTCCATATTGTATCAGGCTGGGTGAACATTACGTACATGAAAAAGTACGAAATTTGTCATACAATCGAGGGCTATATGACTCATTTGATAAGTTTGATAAGTTTGATAAGTTGTATGGATTAAAATATCTACGTACTTTTCTAGCATTGCCATTACTAAAACAATCGCTTTGTTGTTTTCTATCGAACAAGGTAGTGCATGACTTGTTGCCTACAATGAAACAATTGCGGGTGTTGTCTTTGTCCAACTACAAGAGTATCACTGAGGTTCCCAAGTCTATTGGAGATTTGTTGTACCTGCAGTACTTAAATCTTTCTCACACCAATATTGAAAGACTGCCGTCTGAAACATGCAACCTTCACAATCTGCAGTTCTTGTTGTTGGCAGGCTGTAAAAGGCTCTCTGAATTGCCTAAGGACATGGGAAAATTGGTTAATCTACACCACCTTGACGTTAGTGACACTGCATTGAGGCAGTTTCCCGTACAAATAGCCAAACTAGAAAATCTCCAAACTTTGTCTGACTTCGTTGTCAGCAAGCATAATGATGGATTGAAGGTCGCAGAGCTGGGAAAATTTTCCCACCTATATGGAAAACTTTCCATCTCACAGCTACAAAATGTTAATAACCTCTTTGAAGTAGATCAAGCCAATATAAAGATGAAAGAAGAAATAGATGAATTATCTTTGGAATGGGATTGTGATAGCATTGTTCCAAATTCACAAATTAAAAGTGTTGTACTTGAACATTTACGACCCTCAACAAATCTGAAATCTCTCACTATCAAAGGTTGTGGTGGAATCAGCTTTCCAAATTGGTTAGGTGATTTCTCATTTAGAAACATGGTGTATTTAAAGATCTCTAATTGTGATGATTGTTTATGGCTTCCACCCCTTGGACAATTGGAAAATCTAAAAGAACTCTCTATTGAAGGGATGTCATCAGTACAAACAATTGGCATTGAGTTCTATGGAAGTGATGACTCTTCATTTCAACCATTTCCCTCCTTGGAGATTCTACACTTTAAGGATATGCAGGAGTGGGATAAATGGAACATAACTGGAGGTACGTCTATAAAGTTTCCTAGTCTCAAAACTTTGTCACTAAGTAAGTGTCCGAAACTGAGAATAGAAAAAACACTTGAAAATTTCCCTTCCTTAGCTGAACTTGAGTTAAGAGAATGTGCTCTACCAGTGCAATCAATGCCATCATCAAATCATGTATTAAGGCAACTAATGTTCCCTCTAACTTCTCTTCAACGACTGACAATAGACGGATTTCCGTCTCTGGTATCTTTCCCAACAGATAGTCTACTCAAGACCTTGAAATTCCTCACAATCAATAATTGCGAGAATCTAGAGTTCCTTCCTCATGAATACTTGCACAACTATACGTTGCTTGAAGAATTAAAAATATCTTATAGTTGTAATTCAATGATATCATTTACCTTAGGCGTTCTCCCTGTCCTTAAGAGTCTATTTATTGAGGGTTGTAAAAATTTGAAGTCAATATTAATTGCAGAAGACGCGTCCCAAGAGAGTCTCTCAGTTCTTAGAAGCCTAAAAATATGGGATTGTAATGAACTGGAGTCATTTCCTCCTGGCGGATTGGCTACTCCAAACCTCAATTATTTTGCAGTGTGGAAGTGTGAGAAGCTTCCTTCACTACCTGAAGCAATGCACACTCTAGCTGTTCTTCAAGAAATGGAAATTGATAATCTACCAAACCTTCAATCTTTTGCCATATATGTTTTACCTTATGCTTTGCGGGAACTGACAGTTGGCTTTGTTGGAGGAATTATGCGGCATATTAAACATTCTTGGGAATATCTCCCTTATCTTTCAGTGTTGCGAATTAACGGCGATGGTACGATTAAGATGTTGCTGGGGCGGCCATTGCTTTCTGCAAAGCTTGTGACATTATGCATATGTGGTCTTGATGATACAAGCATTGATGACAAGTGGCTTCAACATCTCACTTCTCTCCAAAACTTTGAGATTGTTAATGCTCCCAAACTCAAGTTCTTGCCAAAGAAAGGATTGCCTTCCTCTCTTTCATTACTAAGTATGACTCGCTGTCCATTACTGGTAGCGAAATTGCGGAGGAAGAGAGGCCAAGAATGGCGTAAGATTGCTCACATTCCAGCCATAATTATTGACGACGAATTGATCACATAA 3693 0.3845 MAGTMRETPLVSASVEALLQKLVSADFPSTKVHVPLLINLKKTLTKIQPVLDHYAVNTKWLDLLIDVVHEVDRLFDQISIELEPHYQTLTPTTKVHNIFHSRFKQIHDVINSKIQKLTGRLECLILGELGFSDYSNVSYGTPSSSILDDESSIYGRGMDKEKLKHLLLSNDGGGNGKMGIISIVGMGGIGKTTLAKLLYNDPQVKENFELKVWAYISKDFDAVRIFETILESIASQSIGNDNLSSLILESHNAKGDDTIYQNLLLLSLQQILNTSKFLLVLDDVWDTKSVDWIRLMDTFNAGEMGSKIIITTRDERVARSMQTIPSVYYLRPLESEDCWSLFARYAFGTYHGQQRSYLEKIGRKIAKKCDGLPLAAIEFGAILYGKLSLDDWDCVLESNIWESTNPKVHAALESSYHFLLPPIKRCFAYCSIFPKKYILEKKMVVQLWIAEDLVDSFAGQESWKVGEEYFDVLVSKSLIQRRSTEDKEANFEMHNLVHDLATMVSSPYCIRLGEHYVHEKVRNLSYNRGLYDSFDKFDKFDKLYGLKYLRTFLALPLLKQSLCCFLSNKVVHDLLPTMKQLRVLSLSNYKSITEVPKSIGDLLYLQYLNLSHTNIERLPSETCNLHNLQFLLLAGCKRLSELPKDMGKLVNLHHLDVSDTALRQFPVQIAKLENLQTLSDFVVSKHNDGLKVAELGKFSHLYGKLSISQLQNVNNLFEVDQANIKMKEEIDELSLEWDCDSIVPNSQIKSVVLEHLRPSTNLKSLTIKGCGGISFPNWLGDFSFRNMVYLKISNCDDCLWLPPLGQLENLKELSIEGMSSVQTIGIEFYGSDDSSFQPFPSLEILHFKDMQEWDKWNITGGTSIKFPSLKTLSLSKCPKLRIEKTLENFPSLAELELRECALPVQSMPSSNHVLRQLMFPLTSLQRLTIDGFPSLVSFPTDSLLKTLKFLTINNCENLEFLPHEYLHNYTLLEELKISYSCNSMISFTLGVLPVLKSLFIEGCKNLKSILIAEDASQESLSVLRSLKIWDCNELESFPPGGLATPNLNYFAVWKCEKLPSLPEAMHTLAVLQEMEIDNLPNLQSFAIYVLPYALRELTVGFVGGIMRHIKHSWEYLPYLSVLRINGDGTIKMLLGRPLLSAKLVTLCICGLDDTSIDDKWLQHLTSLQNFEIVNAPKLKFLPKKGLPSSLSLLSMTRCPLLVAKLRRKRGQEWRKIAHIPAIIIDDELIT 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01860 1230 Gene3D Ribonuclease Inhibitor 547 917 IPR032675 -
Vivi5g01860 1230 FunFam Probable disease resistance protein At1g63360 416 503 - -
Vivi5g01860 1230 Gene3D - 332 414 IPR042197 -
Vivi5g01860 1230 PRINTS Disease resistance protein signature 369 383 - -
Vivi5g01860 1230 PRINTS Disease resistance protein signature 180 195 - -
Vivi5g01860 1230 PRINTS Disease resistance protein signature 864 880 - -
Vivi5g01860 1230 PRINTS Disease resistance protein signature 271 285 - -
Vivi5g01860 1230 SUPERFAMILY L domain-like 493 933 - -
Vivi5g01860 1230 FunFam Probable disease resistance protein At1g61300 141 324 - -
Vivi5g01860 1230 Gene3D - 415 503 IPR036388 -
Vivi5g01860 1230 SUPERFAMILY L domain-like 921 1202 - -
Vivi5g01860 1230 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 430 IPR027417 -
Vivi5g01860 1230 Gene3D Ribonuclease Inhibitor 942 1098 IPR032675 -
Vivi5g01860 1230 Gene3D - 142 326 IPR027417 -
Vivi5g01860 1230 PANTHER DISEASE RESISTANCE PROTEIN RP 39 882 IPR044974 GO:0006952
Vivi5g01860 1230 Pfam NB-ARC domain 176 398 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01860 Vivi-Chr5 69659829 69666640 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01860 181 675 WRKY Transcription Factor Family AT5G45050 23.732 2.15e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01860 - - tpra:123913254 1442.94