Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01859 ATGGCGGGTACTATGAGAGAAACACCACTCGTCTCAGCTTCTGTGGAGGCGTTGTTACAAAAGCTTGTTTCTGCCGACTTCCCGAGCACGAAGGTTCACGTTCCACTCTTGATAAACCTGAAGAAAACCCTCACGAAGATTCAACCTGTACTTGATCATTATGCCGTGAACACCAAATGGCTGGATCTGCTGATAGATGTTGTACACGAAGTTGACAGATTGTTTGACCAAATCAGCATCGAACTGGAACCTCACTATCAAACCCTAACTCCTACTACTAAGGTGCATAACATTTTTCATTCTCGTTTCAAGCAGATTCATGATGTCATCAATTCTAAAATCCAGAAGTTAACTGGAAGATTAGAATGCTTGATTTTAGGTGAATTAGGGTTTTCGGATTACAGCAATGTTTCTTATGGAACTCCCTCAAGTTCTATTTTAGATGATGAATCTTCTATTTATGGGCGAGGCATGGATAAAGAAAAACTCAAACATCTTTTGTTATCTAATGATGGTGGTGGTAATGGTAAAATGGGAATTATTTCCATTGTCGGTATGGGAGGGATTGGGAAAACAACCCTTGCTAAACTCCTTTACAATGATCCGCAAGTTAAGGAGAATTTTGAGTTAAAAGTGTGGGCATATATCTCAAAAGATTTCGATGCTGTTAGAATTTTTGAAACCATTCTTGAATCTATCGCATCACAGTCAATTGGTAATGATAACCTCAGCTCTCTAATTCTTGAATCTCACAATGCAAAAGGAGATGACACTATTTACCAGAATCTTCTATTATTGTCATTGCAACAAATTTTAAATACTTCCAAATTTTTGCTAGTGCTAGATGATGTGTGGGATACAAAATCTGTTGATTGGATACGTTTGATGGACACCTTTAATGCTGGGGAAATGGGAAGTAAAATCATCATCACAACTCGGGATGAAAGAGTTGCAAGATCCATGCAAACGATTCCCTCTGTCTACTATTTGAGGCCTCTGGAAAGTGAAGATTGCTGGTCTTTATTTGCCAGATATGCATTTGGAACATATCACGGCCAACAACGATCCTATCTAGAGAAAATTGGTAGGAAAATTGCAAAAAAATGTGATGGATTACCATTAGCTGCAATAGAATTTGGGGCTATTCTTTATGGCAAATTGTCCCTAGATGATTGGGATTGTGTGCTAGAAAGTAACATTTGGGAATCGACAAATCCCAAGGTGCACGCTGCTCTAGAATCAAGTTACCATTTTCTTTTGCCTCCTATAAAACGATGTTTCGCATATTGCTCTATTTTCCCAAAGAAGTACATCTTAGAAAAGAAAATGGTAGTTCAGTTGTGGATTGCAGAAGACTTGGTAGATTCGTTCGCTGGTCAGGAAAGTTGGAAAGTTGGAGAAGAATACTTTGATGTACTAGTGTCAAAATCTTTGATACAACGGCGGTCTACCGAGGACAAAGAAGCAAACTTTGAAATGCATAACCTTGTCCATGATTTAGCCACGATGGTTTCATCTCCATATTGTATCAGGCTGGGTGAACATTACGTACATGAAAAAGTACGAAATTTGTCATACAATCGAGGGCTATATGACTCATTTGATAAGTTTGATAAGTTTGATAAGTTGTATGGATTAAAATATCTACGTACTTTTCTAGCATTGCCATTACTAAAACAATCGCTTTGTTGTTTTCTATCGAACAAGGTAGTGCATGACTTGTTGCCTACAATGAAACAATTGCGGGTGTTGTCTTTGTCCAACTACAAGAGTATCACTGAGGTTCCCAAGTCTATTGGAGATTTGTTGTACCTGCAGTACTTAAATCTTTCTCACACCAATATTGAAAGACTGCCGTCTGAAACATGCAACCTTCACAATCTGCAGTTCTTGTTGTTGGCAGGCTGTAAAAGGCTCTCTGAATTGCCTAAGGACATGGGAAAATTGGTTAATCTACACCACCTTGACGTTAGTGACACTGCATTGAGGCAGTTTCCCGTACAAATAGCCAAACTAGAAAATCTCCAAACTTTGTCTGACTTCGTTGTCAGCAAGCATAATGATGGATTGAAGGTCGCAGAGCTGGGAAAATTTTCCCACCTATATGGAAAACTTTCCATCTCACAGCTACAAAATGTTAATAACCTCTTTGAAGTAGATCAAGCCAATATAAAGATGAAAGAAGAAATAGATGAATTATCTTTGGAATGGGATTGTGATAGCATTGTTCCAAATTCACAAATTAAAAGTGTTGTACTTGAACATTTACGACCCTCAACAAATCTGAAATCTCTCACTATCAAAGGTTGTGGTGGAATCAGCTTTCCAAATTGGTTAGGTGATTTCTCATTTAGAAACATGGTGTATTTAAAGATCTCTAATTGTGATGATTGTTTATGGCTTCCACCCCTTGGACAATTGGAAAATCTAAAAGAACTCTCTATTGAAGGGATGTCATCAGTACAAACAATTGGCATTGAGTTCTATGGAAGTGATGACTCTTCATTTCAACCATTTCCCTCCTTGGAGATTCTACACTTTAAGGATATGCAGGAGTGGGATAAATGGAACATAACTGGAGAAGACGCGTCCCAAGAGAGTCTCTCAGTTCTTAGAAGCCTAAAAATATGGGATTGTAATGAACTGGAGTCATTTCCTCCTGGCGGATTGGCTACTCCAAACCTCAATTATTTTGCAGTGTGGAAGTGTGAGAAGCTTCCTTCACTACCTGAAGCAATGCACACTCTAGCTGTTCTTCAAGAAATGGAAATTGATAATCTACCAAACCTTCAATCTTTTGCCATATATGTTTTACCTTATGCTTTGCGGGAACTGACAGTTGGCTTTGTTGGAGGAATTATGCGGCATATTAAACATTCTTGGGAATATCTCCCTTATCTTTCAGTGTTGCGAATTAACGGCGATGGTACGATTAAGATGTTGCTGGGGCGGCCATTGCTTTCTGCAAAGCTTGTGACATTATGCATATGTGGTCTTGATGATACAAGCATTGATGACAAGTGGCTTCAACATCTCACTTCTCTCCAAAACTTTGAGATTGTTAATGCTCCCAAACTCAAGTTCTTGCCAAAGAAAGGATTGCCTTCCTCTCTTTCATTACTAAGTATGACTCGCTGTCCATTACTGGTAGCGAAATTGCGGAGGAAGAGAGGCCAAGAATGGCGTAAGATTGCTCACATTCCAGCCATAATTATTGACGACGAATTGATCACATAA 3237 0.3886 MAGTMRETPLVSASVEALLQKLVSADFPSTKVHVPLLINLKKTLTKIQPVLDHYAVNTKWLDLLIDVVHEVDRLFDQISIELEPHYQTLTPTTKVHNIFHSRFKQIHDVINSKIQKLTGRLECLILGELGFSDYSNVSYGTPSSSILDDESSIYGRGMDKEKLKHLLLSNDGGGNGKMGIISIVGMGGIGKTTLAKLLYNDPQVKENFELKVWAYISKDFDAVRIFETILESIASQSIGNDNLSSLILESHNAKGDDTIYQNLLLLSLQQILNTSKFLLVLDDVWDTKSVDWIRLMDTFNAGEMGSKIIITTRDERVARSMQTIPSVYYLRPLESEDCWSLFARYAFGTYHGQQRSYLEKIGRKIAKKCDGLPLAAIEFGAILYGKLSLDDWDCVLESNIWESTNPKVHAALESSYHFLLPPIKRCFAYCSIFPKKYILEKKMVVQLWIAEDLVDSFAGQESWKVGEEYFDVLVSKSLIQRRSTEDKEANFEMHNLVHDLATMVSSPYCIRLGEHYVHEKVRNLSYNRGLYDSFDKFDKFDKLYGLKYLRTFLALPLLKQSLCCFLSNKVVHDLLPTMKQLRVLSLSNYKSITEVPKSIGDLLYLQYLNLSHTNIERLPSETCNLHNLQFLLLAGCKRLSELPKDMGKLVNLHHLDVSDTALRQFPVQIAKLENLQTLSDFVVSKHNDGLKVAELGKFSHLYGKLSISQLQNVNNLFEVDQANIKMKEEIDELSLEWDCDSIVPNSQIKSVVLEHLRPSTNLKSLTIKGCGGISFPNWLGDFSFRNMVYLKISNCDDCLWLPPLGQLENLKELSIEGMSSVQTIGIEFYGSDDSSFQPFPSLEILHFKDMQEWDKWNITGEDASQESLSVLRSLKIWDCNELESFPPGGLATPNLNYFAVWKCEKLPSLPEAMHTLAVLQEMEIDNLPNLQSFAIYVLPYALRELTVGFVGGIMRHIKHSWEYLPYLSVLRINGDGTIKMLLGRPLLSAKLVTLCICGLDDTSIDDKWLQHLTSLQNFEIVNAPKLKFLPKKGLPSSLSLLSMTRCPLLVAKLRRKRGQEWRKIAHIPAIIIDDELIT 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01859 1078 Gene3D Ribonuclease Inhibitor 857 946 IPR032675 -
Vivi5g01859 1078 PANTHER DISEASE RESISTANCE PROTEIN RP 39 883 IPR044974 GO:0006952
Vivi5g01859 1078 FunFam Probable disease resistance protein At1g63360 416 503 - -
Vivi5g01859 1078 Gene3D - 142 326 IPR027417 -
Vivi5g01859 1078 SUPERFAMILY L domain-like 493 940 - -
Vivi5g01859 1078 PRINTS Disease resistance protein signature 180 195 - -
Vivi5g01859 1078 PRINTS Disease resistance protein signature 369 383 - -
Vivi5g01859 1078 PRINTS Disease resistance protein signature 271 285 - -
Vivi5g01859 1078 PRINTS Disease resistance protein signature 576 592 - -
Vivi5g01859 1078 FunFam Probable disease resistance protein At1g61300 141 324 - -
Vivi5g01859 1078 Pfam NB-ARC domain 176 398 IPR002182 GO:0043531
Vivi5g01859 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 430 IPR027417 -
Vivi5g01859 1078 Gene3D - 415 503 IPR036388 -
Vivi5g01859 1078 Gene3D - 332 414 IPR042197 -
Vivi5g01859 1078 Gene3D Ribonuclease Inhibitor 520 856 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01859 Vivi-Chr5 69659829 69666642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01859 181 675 WRKY Transcription Factor Family AT5G45050 23.732 2.86e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01859 - - vvo:131632030 1055.05