Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01819 ATGGGTGATGGAGGCGTGGCGTGTATGCCTCTACAGCAGCAGCAGCAACAGCGTGTTATTGAGAAGTTGCCGAGTGCGGCGGAGGAGACGATTTGTGGAGGGAAGAGTGAGAATGGTGTCAGTTCTGAGTTGGTTAAGGTTCCTGAGAAGAAGAAGGTGATTAAAGTGAAGAAGGTGAAGAAGATTGTGAAGAAAGTTAAGAAGAAAATAGTGCCTGTGAAGAAGAAGGAGAATGTGAACGTGAAAAAAGAATTGGCGTTGGATATAGTGAGCAGCAATGGTGTTGAGAGTGGTGAAATATGTGGGCAGAAGGAAGAAGTTGAAGAGGGTGAATTGGGGACTTTGAAGTGGCCGAGGAATGAATTGGAGAATGGAGAGTTTGTGCCTGAGAAGCTGCTGCCGTTGTCATCCTCACCACCACCACCACCACGGAGTAATGAAATTGAGAATGGGGATATTGCCACTGAGAGGTGGAAAAAAATGCAGGTGGAGAAGGGCGAAGTTGACATATGGAGAAAAAAGGAAATAATTTCTGAGAAGGGCTGGAAAGGTGAAAATGAGAAAGGGGCATATGGGTCATGGAGAGGTGGTATAAGCAGTGATGTTGAGAAGGGAGAATTCATTCCGGATAGGTGGCATAAAGGAGACACAGGTCAGGATGACTATGGGTACAGTAGAATCAACAGGTACGAGTCATGTCGGGACAAAGGGTGGAAAACTGAACGTGACTGGGAGTGTACACCATCTTCTGGGAGGTATGCAGGTAATGATTTTTATAGGAAGAAGGAATTTAATAGAAGTGGGAGTCAGCATGTTAAAAGTGCACCTAGGTGGGAAGGTGGACAAGAGAGAAATATAAGGATCAGTTCAAAGATTGCGGATGAGGAGAAAAATGAATACAATGGTAGGATACATGCACGGGAATATTCTTCTGGAAGTCGTTTGAAGAGGCATGGCAATGATTCAGACGGCTGGGAGCGGAAGCAGTATGGAGATTATGCTGGTTTCAAAAGTCGAAGACTATGTGACGATGGCTCACACCATGTCTATTCTGATCACCATGTTTATTCAGAGAATCATTCTCGCCATTCTGTGGAGAGATCCTACAGAAACAGTTCTTCGAAGTTGTCTGCCGATAAGTATTCTTCTAGGCATCATGAATCTTCTTTGCCTACCAGATTAGCTTATGATAAACATGGATGCAGTCCCCGTCATTCTGAACGATCTCCACACGATCGAGCTAGATATTATGATAATAAAGATCACACTTCTGCCCGTCGGTCACCCTATGGCCGTGATAGATCACCCTATGACCGTGATAGATCACCCTATGGCCGTGATAGATCTCCGTATAGCCGTGAAAGATCTCCATATAGCCGTGACAGATCTCCATATAGCCGTGAGAGATCTCCATATAACCGTGAGAAATCTCTGCATGGTCGTGAAAGATCTCCATATAGCCGTGAGAGATCTCCATATAACCGTGAAAAATCTCTACATGGTCGTGAAAGATCCCCATGTGATAGGAATTGGGATAGAAGTCGTAACCGTGATCTCAAATTAAGAAGTCCCATTCACGCTGAGCGGTCCCCACAAAATCGTGGTCGGCATCATGGCTACAGGGACCGAACTCCAAACTTGATAGAGCAATTCCCATTTGATCGAACTAGACAAAATAATGATCGAGAAACAAGTAATAAAACCTTATCAACTGAAAAACATAATTCACAACATAGCTGTAAGAATCCTGAAAACAAAAATATTCAAAAGGAGCCAACTCTTTCAGGTAAAGAATTGATAGGGGAAAGAAGTGTTCACGATGCCAATGGGCCTGTTGTGAAAGGTGTCTGCAATGAACCTGAAAAGGAACAAGAGTCCTGCAGGCCAGCTATAAACTGCCAAGATTCTCCTTGCTTGCTCCTACCTACTGAGGAGCAGCCTTCTATGGAAGAAGATATGGACATATGTGATACTCCCCCACATGTTCCTGTGTTTGCTGATTCATCATCAGGAAAATGGTTTTACCTTGATTATTGTGGTTTGGAACATGGTCCTTCTAAATTATCTGACATCAAGGTTCTTGTTGACGAGGGTGTATTAATGTCGGATCATTTTATTAAACACATTGACAGTGACAGATGGTTAACTGTTGAGAATGCAGCATCACCACTGGTAGCTCAGAGTTTTCCATTGATTGTGTCAGACTCCATAACCCAGCTTGTAAATCCTCCAGAAGCTTCCGGTAATCTTTTGTCAGATACTGGAGATATTCTTCAATCTGGACCCAAGAATGATCAGGAAAGGCAAGCCCCTTTCCTGAAGTCAATGTTATACCCTGATGACAATATGCTTGCACCTGAGCCGTTGGATGACCTCCATTTTGATGAAAGGGTCGGTGTTCTGTTAGAGGGTTATGATGTCATTCCTGGAAGGGAGCTTGAGGCAATAACAGAAGCCCTGCAAATGAATTTTGAATATGCAGAGTGGGACGATTTGGGAGCCTACAAAGGTTTTCCTGAGCCCGATACTTGCCTGAGCATGGACCATGATTCAAAAGTTGATTTTGCATCAAATGAGCAAGACTTCGACAAGGATAACGGCTTTACCCTTGGCGTTCCTGATGACTGGTTTTCTGCTCAATGGTCATGCAAAGGCGGTGACTGGAAGAGGAATGAGGAATCCCAAGATAGATATTCTAAAAAGAAACTGGTCCTAAATGATGGGTTTCCTCTATGTCAAATGCCTAACTATGGATGTGAAGATCCTCGGTGGGCTAGGAAAGAAGACTTGTATTATCCATCTCACAATAGAAAGCTTGACATTCCTCTTTGGGCTTTTTGTACTGATGAGTTGGTTGATTGCAGTGGTACTGTGAGCAGACCAGTTCAAAGCAAGTTTATTTCTGTTAGAGGAGTAAAAGGAAATGTTCACTCAGTGGTCAGGATAAATTCATGCGTGGTCAAGGACCAGGGATCATTGGTCTCTGAGTCACACCACAAGACCCAAGGCAAGGATAGATATCATTCAAGGTCAGCCCGACCTTTATCATCAACCAGGGATAGCAAGAGATCATCATCTGAAGAAGATTCACAGTTTAAAACTGTTATTGATCAAGGTTCTCAAGGCTATTGCAAGAGTGTAGAATCCATTAATATTTCTCAAGATCATCTCTGTGCCGTCCATGACTTGCAGTTGCATTTGGGCGACTGGTATTATCTTGATGGTTCGGGGCGAGAAAGAGGACCTTCGTCGTTTTCAGATCTACAGTCTTTAGTAGACCAAGGAATTATAAAGAAGTATAGCAGTGTGTTCAGGAAATGTGATAAACTCTGGGTTCCTGTTACATCTTCAACAGAAACTTTGGATGTCCATCACAAGAGCCACCAAGAAAGCAGTTCAGCGTCTAGTGAATTTTCAGAACATCAAGGTGTTTCATTTGGTGAACCCCATTCTAAGTCAAATATGTTTAACAGCATATACCCCCAGTTTGTTGGTTATACTCGCGGGAAACTACATGAATTAGTAATTAAATCATATAAGAGCCGGGAATTTGCTGCAGTAATAAATGAGGTTTTAGATCCTTGGATCAATGCAAGACAACCAAAGAAGGAAGTTGAGAAACAAATATATTGGAAATCAGAAGGTGATGCGCATGCTTCCAAAAGAATCCGGGTGCTGGTTGAAGATAGTGAAGAAGAGAGTGATTTTGAAGATGACAGCTTTATTATTGAGAATGATAAATCCACTCTTGAGGCCCTGTCTGGTGATGTTACTTTCTCTGCTGAAGAGAACGGCGTTACTGTTTCCAAGGAGGAAAGGTGGGGCTTATTGGACGGTCGAATGTTGGCACGAGTCTTCCACTTCTTGAGGTCTGATTTGAAGTCTCTCGTCTTTGCGTCCATGACATGCAAGCATTGGAAAGCGTCTGTAAAGTTTTACAAAGAAGTTTCGAAAAATGTCAACTTGTCATCCCTTGGCCATTTTTGCACCGATTCCATACTTTGGAATATTATGAATGCCTATGAAAAAGACAAAATCAAATCTATGATTCTAATGGGTTGCACCAATATTACTGCTGACATGCTAGAGAAAGTGTTTCTCTTATTTCCTGGTTTATCTACTGTAGATATCAGAGGGTGCAATCAGTTTGAGGAGCTCACTCCTAAATTTTCCAATGTGAAATGGATCAAGAGCCGAAATTCACGCATAACTAAAATTGCAGATGAGCCACATAAAATCAGAAGCCTCAAACAGATTACTGATCAATCTTTGTCCGTTTCTAAAGCCAGTAGTTTTGGTATTAGGGATAATTTTGGTGAGCTGAAGGTTTATTTTGATAGTGTGGACAAGAGAGACACGGTGAAGCAATTATTCCGTCAAAATTTATACAAGCGTTCAAAATTATATGATGCAAGAAAGTCCTCTTCTATCCTCTCTAGAGATGCTCGAACAAGACGATGGTCAATTAAGAAGTCGGAAAGTGGTTACAAAAAGATGGAGGAATTTCTTGCTTCAAGACTCAGGGAAATTATGAAGGCAAATGCTTGTGACTTTTTTGTACCCAAGGTTGCAGAAATTGAGGCTAAAATAAAAAGAGGTTATTACAGTGGGCATGGGCTGAGCTCTGTGAAGGAGGACATAAGCAGAATGTGCCGAGATGCAATGAAGGCAAAGAATCGTGGTGATGCTAATGATATGAATCATGTTATCTCATTATTTATTCAGCTTGCAACACGGTTGGAGGAAAGTTCTAAATATGTGAATGATAGAGATGCGCAATTGAAGTTATCGGGAAATGACTTACCGTTGGCATTCTGTTCTACTTCCTCTAAGTACAAGAAGAATAGATTAGTGACTGAGAGAAAGTATAGGAGTGATGGAATACATGGTGGTTTGGATAATGGAGAGTATGCTTCTGATAGAGAAATCAGAAGGCGTTTATCAAAATTGAATAAGAAATCTATGGACTCAGAGAGTGAGACATCTGATGACCTTGATAGGTCTTCTGAAGATGGCAATAGTGACGGTGATACTTCAACCTCCAATACTGATAGTGACCAAGAAGCTCATCTAGAGAGACGAACCAGAGAATCAAAGGGAAATGGATACTTCACACCTAGTGATGGGTTGGATTTCATTACAGATGAACGTGAATGGGGAGCTCGTATGACGAAAGCAAGTTTGGTTCCTCCTGTTACTCGGAAATATGATGTCATTGATCAATATGTCATTGTAGCTGATGAGGATGATGTGCAAAGGAAGATGCGGGTTTCATTACCAGATGACTATGCAGAGAAGTTGGCTGCACAAAAGAATGGCACTGAGGAGTCTGATATGGAACTTCCTGAAGTCAAGGATTACAAACCTAGAAAAAGGCTTGAAAATGAGGTTATTGAGCAAGAGGTTTATGGAATCGATCCCTATACACACAATCTTTTACTTGATTCTATGCCTGAGGGGTTAGATTGGTCTCTTCAAGAGAAGCATGTGTTTATAGAAGAGACACTCCTTCGGACATTGAATATGCAAGTTAGGCATTTTACCGGAACTGGAAGCACTCCAATGAGCTACCCTTTGCAGCCTGTTATCCAAGAGATTGAAAGGTGTGCAGAGGAGCACCGTGACGCAAGAATGATTGGTATGTGCCAAGGTATCCTAAAAGCCATAGGCAGACGTCCTGATGATAAATATGTAGCTTATAGAAAGGGGCTTGGTGTTGTTTGCAATAAGGAAGAGGGCTTTGGCGAAGATGATTTTGTCGTGGAGTTTCTTGGAGAGGTGTATCCTGTATGGAAGTGGTTTGAGAAACAAGATGGGATACGATCTCTGCAAAAAAATAGCAAAGATCCAGCACCAGAATTTTATAACATATACCTCGAGAGGCCAAAGGGTGATGCTGATGGTTATGACTTGGTTGTTGTTGATGCCATGCATAAGGCTAACTATGCCAGTCGAATATGTCATTCATGCCGACCTAATTGTGAAGCAAAAGTTACTGCTGTTGGCGGTCATTATCAAATTGGTATATATAGTGTTCGTAAAATTCAACATGGCGAGGAGATCACTTTTGATTACAACTCTGTTACAGAGAGCAAGGAGGAATATGAAGCATCAGTCTGTTTATGTGGAAGCCAAGTTTGCCGAGGAAGCTATCTAAATTTGACTGGTGAAGGGGCTTTCCAAAAGGTACTGAAAGAGTGGCATGGAATTCTTGACTGTCATTATTTGATGCTAGAAGCCTGTGAATTAAACTCCGTTTCTGAAGAGGACTACAATGACTTGGGAAGAGCTGGTTTAGGCAATTGTTTGCTTGGAGGCTTGCCAGATTGGCTAGTTGCTTATGCGGCTCGCCTTGTGAGATTTATTAATTTTGAAAGAACTAAACTTCCTGAGGCAATTCTAAAGCATAATTTGGAAGAAAAAAGAAAATATTTTTCAGATATATGTCTTGAAGTTGAGAGGAGTGACGCAGAGGTTCAGGCTGAGGGTGTATACAACCAGAGGCTTCAGAATCTTGCTGTCACGCTTGATAAGGTAAGGTATGTTATGAGATGTGTTTTTGGTGATCCAATGAAAGCTCCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAGTTGTTTCGCTCCTCTGGAAAGGAGAGGATTCGTTTGTTGAGGAGCTTCTTCAATGCCTGACTCCTCACGTGGAAGAGTCTACCTTGAATGATCTCAAGTCCAAAACTCGTGCTCGCGATCCTCTGAATTCTAAAGATATTCAGAAAGCTATTCAGAAATCTCTGTTGTGGTTGAGAGACGAGGTTCGAAATCTTCCTTGTACATACAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTATGCTTATACCAAGTACTTCTTTAGAGTACTGGATTATAAAACTACTACTTCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCTAAGTATGCTGACAAGTTGGGAGCAGGATTTCAGGAGTATCGGAAGATATATGGTCAAAATTATTGTTTAGGGCAACTGATATTTTGGCATAATCAGAGTGATGGGGAGCCTGATTGTACCCTGGCTAGAGCTAGCAAGGGAAGCTTGTCATTGCCAGACATCAGTTCCTTCTATGCTAAGGCTCATAAGCCTTCACGGCAACGTGTTTATGGTCCAAAGACTGTCAGATCCATGTTGGCAAGAATGGAGAAGCATCCGCAGAGACCTTGGCCCAAAGACCAGATCTGGTCATTCAAAAATAGTCCTAAATTTTTTGGTAGCCCAATGCTAGACGCTGTAATTAACAATACTCCACTGGATAGGGAGATGGTTCACTGGTTGAAGCACAGACCTGCAATATTCCAGGCCATGTGGGACCAGTAA 7371 0.4208 MGDGGVACMPLQQQQQQRVIEKLPSAAEETICGGKSENGVSSELVKVPEKKKVIKVKKVKKIVKKVKKKIVPVKKKENVNVKKELALDIVSSNGVESGEICGQKEEVEEGELGTLKWPRNELENGEFVPEKLLPLSSSPPPPPRSNEIENGDIATERWKKMQVEKGEVDIWRKKEIISEKGWKGENEKGAYGSWRGGISSDVEKGEFIPDRWHKGDTGQDDYGYSRINRYESCRDKGWKTERDWECTPSSGRYAGNDFYRKKEFNRSGSQHVKSAPRWEGGQERNIRISSKIADEEKNEYNGRIHAREYSSGSRLKRHGNDSDGWERKQYGDYAGFKSRRLCDDGSHHVYSDHHVYSENHSRHSVERSYRNSSSKLSADKYSSRHHESSLPTRLAYDKHGCSPRHSERSPHDRARYYDNKDHTSARRSPYGRDRSPYDRDRSPYGRDRSPYSRERSPYSRDRSPYSRERSPYNREKSLHGRERSPYSRERSPYNREKSLHGRERSPCDRNWDRSRNRDLKLRSPIHAERSPQNRGRHHGYRDRTPNLIEQFPFDRTRQNNDRETSNKTLSTEKHNSQHSCKNPENKNIQKEPTLSGKELIGERSVHDANGPVVKGVCNEPEKEQESCRPAINCQDSPCLLLPTEEQPSMEEDMDICDTPPHVPVFADSSSGKWFYLDYCGLEHGPSKLSDIKVLVDEGVLMSDHFIKHIDSDRWLTVENAASPLVAQSFPLIVSDSITQLVNPPEASGNLLSDTGDILQSGPKNDQERQAPFLKSMLYPDDNMLAPEPLDDLHFDERVGVLLEGYDVIPGRELEAITEALQMNFEYAEWDDLGAYKGFPEPDTCLSMDHDSKVDFASNEQDFDKDNGFTLGVPDDWFSAQWSCKGGDWKRNEESQDRYSKKKLVLNDGFPLCQMPNYGCEDPRWARKEDLYYPSHNRKLDIPLWAFCTDELVDCSGTVSRPVQSKFISVRGVKGNVHSVVRINSCVVKDQGSLVSESHHKTQGKDRYHSRSARPLSSTRDSKRSSSEEDSQFKTVIDQGSQGYCKSVESINISQDHLCAVHDLQLHLGDWYYLDGSGRERGPSSFSDLQSLVDQGIIKKYSSVFRKCDKLWVPVTSSTETLDVHHKSHQESSSASSEFSEHQGVSFGEPHSKSNMFNSIYPQFVGYTRGKLHELVIKSYKSREFAAVINEVLDPWINARQPKKEVEKQIYWKSEGDAHASKRIRVLVEDSEEESDFEDDSFIIENDKSTLEALSGDVTFSAEENGVTVSKEERWGLLDGRMLARVFHFLRSDLKSLVFASMTCKHWKASVKFYKEVSKNVNLSSLGHFCTDSILWNIMNAYEKDKIKSMILMGCTNITADMLEKVFLLFPGLSTVDIRGCNQFEELTPKFSNVKWIKSRNSRITKIADEPHKIRSLKQITDQSLSVSKASSFGIRDNFGELKVYFDSVDKRDTVKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWSIKKSESGYKKMEEFLASRLREIMKANACDFFVPKVAEIEAKIKRGYYSGHGLSSVKEDISRMCRDAMKAKNRGDANDMNHVISLFIQLATRLEESSKYVNDRDAQLKLSGNDLPLAFCSTSSKYKKNRLVTERKYRSDGIHGGLDNGEYASDREIRRRLSKLNKKSMDSESETSDDLDRSSEDGNSDGDTSTSNTDSDQEAHLERRTRESKGNGYFTPSDGLDFITDEREWGARMTKASLVPPVTRKYDVIDQYVIVADEDDVQRKMRVSLPDDYAEKLAAQKNGTEESDMELPEVKDYKPRKRLENEVIEQEVYGIDPYTHNLLLDSMPEGLDWSLQEKHVFIEETLLRTLNMQVRHFTGTGSTPMSYPLQPVIQEIERCAEEHRDARMIGMCQGILKAIGRRPDDKYVAYRKGLGVVCNKEEGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVGGHYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKEWHGILDCHYLMLEACELNSVSEEDYNDLGRAGLGNCLLGGLPDWLVAYAARLVRFINFERTKLPEAILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCVFGDPMKAPPPLEKLSPEAVVSLLWKGEDSFVEELLQCLTPHVEESTLNDLKSKTRARDPLNSKDIQKAIQKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKYFFRVLDYKTTTSPPVYISPLDLGPKYADKLGAGFQEYRKIYGQNYCLGQLIFWHNQSDGEPDCTLARASKGSLSLPDISSFYAKAHKPSRQRVYGPKTVRSMLARMEKHPQRPWPKDQIWSFKNSPKFFGSPMLDAVINNTPLDREMVHWLKHRPAIFQAMWDQ 2456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01819 2456 ProSiteProfiles SET domain profile. 1887 2026 IPR001214 GO:0005515
Vivi5g01819 2456 MobiDBLite consensus disorder prediction 1648 1673 - -
Vivi5g01819 2456 Pfam Protein SET DOMAIN GROUP 2 C-terminal 2037 2456 IPR045606 -
Vivi5g01819 2456 MobiDBLite consensus disorder prediction 1132 1149 - -
Vivi5g01819 2456 SUPERFAMILY SET domain 1901 2049 IPR046341 -
Vivi5g01819 2456 MobiDBLite consensus disorder prediction 555 569 - -
Vivi5g01819 2456 SMART set_7 1892 2032 IPR001214 GO:0005515
Vivi5g01819 2456 MobiDBLite consensus disorder prediction 303 328 - -
Vivi5g01819 2456 MobiDBLite consensus disorder prediction 993 1032 - -
Vivi5g01819 2456 MobiDBLite consensus disorder prediction 379 544 - -
Vivi5g01819 2456 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 482 2456 - -
Vivi5g01819 2456 MobiDBLite consensus disorder prediction 993 1030 - -
Vivi5g01819 2456 Gene3D SET domain 1896 2057 IPR046341 -
Vivi5g01819 2456 MobiDBLite consensus disorder prediction 570 592 - -
Vivi5g01819 2456 CDD SET_SETD2-like 1900 2048 - -
Vivi5g01819 2456 MobiDBLite consensus disorder prediction 347 593 - -
Vivi5g01819 2456 MobiDBLite consensus disorder prediction 347 369 - -
Vivi5g01819 2456 MobiDBLite consensus disorder prediction 1648 1709 - -
Vivi5g01819 2456 MobiDBLite consensus disorder prediction 1124 1149 - -
Vivi5g01819 2456 Pfam SET domain 1971 2026 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01819 Vivi-Chr5 67191873 67210726 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi5g01819 SET 8.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01819 K22748 - gmx:100781921 3637.43