Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01809 ATGGAATTGACAAGAATCGGTTGTGCGGTTACTTATGTCATTCTTCTTTGTGCTTTGGCTCATGGGGGCTCAGAAGGGAAAGAAGATGACCTATATAGGAATGGTCCTATTTCCTCACCTTTCCTCAACCTTCATGGAAAACAGGCGGAGAATGTGAGAAAACATTGCAGGAAAGAATTGACAGAGAAGAACAATGATGTTAAAGACATCAACTTGCATCCATTGGAAGGAAGCAGTGACATGAGATCTATTCTTCCAACAGAAAACAACATTCACAAAACAACCAAATCATTACCTCCCCATAAGGAAAAAAAAGCATTGGACTGCATAAAAACAAGTGCTACTCCTCCAGCACCTATTTCCGAAGAGAAATTGTCTTCAAGATTCTTGCTAACAAAACATTCTAGATCAACCTTGGCTTTAAAAAACGATCATCATCGTTATAATCGTTATCATCGTCATCATCGCCATCATCGAACACATTCAATCGCAGAAACACCACTTGATCATATATCTCCATTGTCACCATTGTCACCGTTGTCACCATTGTCACCATTGTCACCGTTGTCACCATTGTCACCATTGCCACCAATGTCTAGTGCTAATAGTCCATCCCCCGAGCATTCACTGGCAGCGCCAATTCATCTTTCAACACCAACAATTTCTTCAACACCATCTCCTACTCCTGTTCCTGTTCCTAGTACATCATCACCTACTCCTGTTCCTGTTCCTAGTACACCATCACCTACTCCTGTTCCTGTTCCTAGTATACCATCGCCTACTCCTGTTCCTAGTATTTTTGAACAGTTACCACCGTCTCCGCAACAATCTGCTCCTCCGTCTCATATAACAAGTGTTCCGATAACTTCGCCGCGTTTACTTAACAATACTGAGAAAAAGAAGAAAGCAATTATTTTAGCTGCATCTGTATCAGGAATCATAGTCTTGATAGGATTGTCGCTTTGCTATCGTGAGGCCAAGACCGGTAAAGTGGAGAGAGGAGATGACAACCATTTGCTCATATTAACCTCAAATGATTATTCTGGAGGTCCTCAAAAGATTGTCCGATTAGGAGATGCTAATACAGAAGAATCTGGATCCGGTGTTGTTATTAAAAAAGGAAAGAACTCGTCTAATGGAAGAAATCGGTCCATGAAGGCTGGAGATAATAACAATATCACACTGGCAGAAGCGTCAACATCAGCAGATGTGGGACAAGTAACATCAACTTCTTCTGGAATACCAGCCCCTCCGCCTCCTGGCCCACCGCCACCTCCTCCTCCACGGCCACCTGCTCTTGCATTTCGTCCTCCACCGCCTCCAAAATCCAGCCATCCACCACCTGCTCCTCCTCCCAAACCAATGGCTGGTAAAAACAATGGTGTACCTCTTGGACCGCTAAAACAAGAAAGTTCTAGTGAAGGTGGTGCTTCAAAACCTAAACTAAAGCCGTTCTTTTGGGACAAGGTTAATGCAAAACCTGATCAATCAATGGTGTGGCATGAGATCAATGCAGGGTCATTTGTGTTCAATGAAGAAATGATGGAGTCTTTGTTTGGTTGCGCCAACCAGAATAAAAATGAACGTAGAAAAGATTCACCTTCTCTAGATACTTCAGTGCATTATATTCAGATTATTGACCCTAAGAAAGCACAGAATTTATCAATTCTATTACGTGCTCTGAATGTGACAACAGTAGAAGTCATTGATGCACTAAACGAAGGTAACGAGATTCCTGTGGAGCTTATCCAAACATTGTTGAAAATGGCACCAACACAAGAAGAGGAACTGAAACTTAGGTTATTCTCTGGAGAACTTTCTCAACTAGGTCCAGCTGAGAGGTTTCTCAAAGTACTGGTTGACATTCCATTCGCTTTCAAACGTCTCGAATCTCTCATGTTCATGTTAATTCTTCGAGAAGAGTTCTCAAGCATCAAGGAATCCTTTGAAACATTAGAGGTTGCTTGCGACAAGCTGAGAAAAAGCAGGTTATTCTTAAAACTACTAGAAGCAGTACTCAAAACTGGAAACCGAATGAATGACGGTACATATCGCGGTGGTGCTCAAGCATTTAGGCTTGACACACTTTTAAAACTCTCAGACGTAAAAGGAACAGACGGAAAAACAACACTATTACACTTTGTGGTTCAAGAAATTATACGTTCGGAAGGAATAAGAGCAGTAAGAACCGAAAGAGCAAGCAGAAGCCTTTCAAGCGTAGGAACAGTGGATGCAGATTACGAAAATGAAGAATCAGAAGAACACTATCGTAGCCTTGGACTTCAAGTAGTTTCAAGCTTAAACAAAGAACTTGAAGATGTTAAAAAAGCAGCACTAATAGACGGTGATGCATTGAGTAAAGCGGTTTCGAAAATGGGCCATTCGTTGGTTAAGAGCCGGGACTTTTTGAACAATGATCTTAAGAATTTGGAAGAAGAGAGTGAGTTTCAAATCTGTTTAGAGAAGTTTATGGAACATGCGAAAGGAGAGGTGACGTTGCTTGTTGAAGAAGAAAAGAGGATAATGGGATTGGTTAAGAGTACAGCAGATTATTTCCATGGGAATGCAGGGAAAGATGAAGGGCTGCGTTTGTTTTTGATTGTGCGCGATTTTTTGATAATATTGGATAAGGTTTGCAAGGAAGTGAAAGAAGCTACATTGAAGGCTATGAAGGCTTCTAGTAAGAAAGAGACTCCGTCACCGTCGGTGTCAGTTCCGTCTTCTCCAGATACACGCCAACAGTCGCCACAGCCGCAGCAGCAGTCTTCTGATCTACATAGGCGATTGTTTCCTGCTATTGCGGGGCGGAGAGTGGATTATTCTAGCTCAGATGATGACGATGATTAG 2847 0.4204 MELTRIGCAVTYVILLCALAHGGSEGKEDDLYRNGPISSPFLNLHGKQAENVRKHCRKELTEKNNDVKDINLHPLEGSSDMRSILPTENNIHKTTKSLPPHKEKKALDCIKTSATPPAPISEEKLSSRFLLTKHSRSTLALKNDHHRYNRYHRHHRHHRTHSIAETPLDHISPLSPLSPLSPLSPLSPLSPLSPLPPMSSANSPSPEHSLAAPIHLSTPTISSTPSPTPVPVPSTSSPTPVPVPSTPSPTPVPVPSIPSPTPVPSIFEQLPPSPQQSAPPSHITSVPITSPRLLNNTEKKKKAIILAASVSGIIVLIGLSLCYREAKTGKVERGDDNHLLILTSNDYSGGPQKIVRLGDANTEESGSGVVIKKGKNSSNGRNRSMKAGDNNNITLAEASTSADVGQVTSTSSGIPAPPPPGPPPPPPPRPPALAFRPPPPPKSSHPPPAPPPKPMAGKNNGVPLGPLKQESSSEGGASKPKLKPFFWDKVNAKPDQSMVWHEINAGSFVFNEEMMESLFGCANQNKNERRKDSPSLDTSVHYIQIIDPKKAQNLSILLRALNVTTVEVIDALNEGNEIPVELIQTLLKMAPTQEEELKLRLFSGELSQLGPAERFLKVLVDIPFAFKRLESLMFMLILREEFSSIKESFETLEVACDKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRTERASRSLSSVGTVDADYENEESEEHYRSLGLQVVSSLNKELEDVKKAALIDGDALSKAVSKMGHSLVKSRDFLNNDLKNLEEESEFQICLEKFMEHAKGEVTLLVEEEKRIMGLVKSTADYFHGNAGKDEGLRLFLIVRDFLIILDKVCKEVKEATLKAMKASSKKETPSPSVSVPSSPDTRQQSPQPQQQSSDLHRRLFPAIAGRRVDYSSSDDDDD 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01809 948 MobiDBLite consensus disorder prediction 893 926 - -
Vivi5g01809 948 Pfam Formin Homology 2 Domain 478 875 IPR015425 -
Vivi5g01809 948 MobiDBLite consensus disorder prediction 371 412 - -
Vivi5g01809 948 PRINTS Proline rich extensin signature 185 197 - -
Vivi5g01809 948 PRINTS Proline rich extensin signature 222 243 - -
Vivi5g01809 948 PRINTS Proline rich extensin signature 249 265 - -
Vivi5g01809 948 PRINTS Proline rich extensin signature 410 422 - -
Vivi5g01809 948 MobiDBLite consensus disorder prediction 890 948 - -
Vivi5g01809 948 SUPERFAMILY Formin homology 2 domain (FH2 domain) 423 890 - -
Vivi5g01809 948 MobiDBLite consensus disorder prediction 224 264 - -
Vivi5g01809 948 SMART it6_source 474 890 IPR015425 -
Vivi5g01809 948 MobiDBLite consensus disorder prediction 413 457 - -
Vivi5g01809 948 ProSiteProfiles Formin homology-2 (FH2) domain profile. 472 901 IPR015425 -
Vivi5g01809 948 MobiDBLite consensus disorder prediction 359 480 - -
Vivi5g01809 948 Gene3D Formin, FH2 domain 479 901 IPR042201 -
Vivi5g01809 948 MobiDBLite consensus disorder prediction 217 264 - -
Vivi5g01809 948 PANTHER FORMIN-RELATED 289 937 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01809 Vivi-Chr5 66827189 66832299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01809 439 893 FH2 protein (formin) Gene Family AT5G67470 46.104 1.11e-118 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01809 - - vvo:131606706 1441.02