Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01792 ATGTCCAGTAACATGAGAACTGTTTTTCTCTTCTTCAACCTGTATACTTGTTGGTTATTGATATGCTCTTCTCAGTTGTGTTTAGCAGGAGATACTTTGAGCGCTGGCAAGAATATTACCGGCGATGAAACCATTGTTTCATCTCGAAAAGTATTTGAACTAGGCTTTTTCACTCCCAGCATCAATGGTGGCGGTTTAGAAAGCTTCTTAGGCATATGGTATCACATACAAGATAGGTCAAGAGAACAGCCACAAAAACCAACAGTAGTGTGGGTTGCTAACAGAGACAAACCTATAGCTTTTAATGCAACTGGAGTTTTCAAAATAGCTGAGGATGGGAATCTTGTAGTTGAAGACACATCCGGTAATAACAATACCTATTGGTCATCCAATTTCAAGTCCAAAGTCAAATTCTCTTCTAATTCTTCACCAAAAAACAAGACAATGAAACTTCTGGATTCTGGGAACCTTGTGTTATATGATGATGAAAACATGGTAGTGAAACTCTGGGAGAGCTTTGAAAATCCTACTGACACATTCCTACCAGGTATGAAGATGGATAGGAATCTAAAATTAACTAGTTGGAAAGGTGACGATGACCCAGGAAGCGGGAATTTCAGTTTTAAGATGGAACGAATAGGGGACACCCGTTTCGTAATCATGAACAGAGACCAAATTTATTGGGAGAGCGAAGAGTACGGAACATTGAATTTCCAAGTAAATAATCATGAATCTGAAGACATCAGCTCAGTGGTTTACAGCTTGTTGACCAACTTAAGCTTGCCTATACTGAACAACACAAGGTTGCTCCTCAATTCAACAGGTGTGATACAATGGGTGGACAATTCCTTGCAAGGTGAATCGTTGGTACGGTGGAAGCAGCCAAACACCAAATGCTTAACATATAACGTTTGTGGAAACTTTGCTAGCTGTAACGACAATGATAAGGTATGCAAATGTTTACCTGGGTTCAACACCGATTTGTTGACAGATTCTTCTCTACCAGACAAGGCAGGTTGTACGAGGAGAAAATCAGCACCGTGTACTACAAATGATACAGTGTTCTTGAACTTGAACATGATTAAAACAGGAAGGCCAGATATAAAGTTTGCTGTAGAATATGAAGAAAGTTGCAAAAACAAGTGCCTTGAGATGTGTCCACAGTGCCAGGCCTACTCATATGCTCCACTTCCTACTGATCGCCGGCGTACTTTTAATCCTTCAAACTGTTGGATCTGGACACACAATTTAACTACTCTTAAAGAAGACTACACAAATTGGGATCCTAATCGGAGACTCATTGTCCTAGTTGATAAATCAGACATAGCAACAACTCCAAGAACTTGTGAGCCTTGTGGTTCAAACCCAGTTCCTTATCCTCTTAGTACCGGACCCAATTGTGGAGACCCCACATACTTCAACTTTAGATGCAATCCCTCGATGGGTCAACTTAGCTTCACCAATGATACCACCAGCAACAACATCAGTGTTAATTACAGAGTTATTCGTGTAGCGCCAAGTTCAAAAACGTTTACCATTTATAATGAGGATAATACTTTTAATCAATATTGTGGAGAAGGGTCTCAATACAAAGGAAGTCTTAAGATTTCTCCACCATTTCGCATTTCCAGTGACAATCTGTGCTATGAACAGGTGGTAATTAGTTGGAATCCGCCTTCGGAAGAACCCATTTGTGATAACTCTGCTGATTGCCATGGTTGGAACCATTCTACCTGTAGTAAAGGAAACAGGTGTCTTTGCAATGCAAACTATTATTGGAGTGGCGAGTCTTTAAATTGTACAGAAATGCTTAAATCGTCAACAGGAGGGAAATCTAAAAGCTCATTCTATTTGATTCTTGGATTAGTTCTTACCGGTACGGTTACTCTTGCCTGCATCATTGTTTTTGCTTATGCATGCAGAAGAAGAATAGCTCATATGATTAAGAAAGATAGCGAAAACGTACAAAGAAATACTAGAGGGCGATTTTACGACAGTGAAAGACATGTGAAAGACTTGATAGACATGGAGGGATTGGAAGAGAATGATAATGAGGGAATTGAAGTTCCCTTTTTTGATTTTGAGAGCATACTAATAGCCACAGATGAGTTTTCAGATGTAAATAAACTTGGAAAAGGTGGCTTTGGGCCAGTTTACAAGGGTAAGCTTGGTGGTCAAGAAATTGCCGTAAAGAGACTTTCGAGTGTTTCGTCACAAGGCTTACAGGAATTTAAGAATGAAGTTGTTTTAATTGCCAAACTTCAACATCGAAATCTTGTTAAACTACGGGGCTACTGCGTAAAAGGAGTAGAAAAAATTCTACTTTATGAATATTTGCCTAACAAGAGCTTGGACTTATTGATATTCGATCCAACAAAGAGCGTAATTTTAGATTGGCAAATGCGGTTTGATATAGTTCTCGGAATCGCACGTGGACTGCTCTATCTTCATCAAGATTCAAGACTTAGAGTTATTCATCGAGATTTGAAAACCAGCAACATTCTTCTGGATGAAGATATGCAACCTAAAATATCAGATTTTGGACTAGCAAGAATATTTGGAGGCAAAGAAACTGAAGCGAGCACAGAAAGGGTTGTTGGTACATATGGATATATGTCTCCTGAATATGCGTTGGATGGATATTTCTCAACAAAGTCAGATGTTTTTAGTTTTGGTGTTGTCTTGCTTGAAATCATAAGTGGAAAAAGGAACACTGGATTCTATCGGTCTAAAGAAATTTCAAGTCTTCTTGGTTATGCTTGGAGATTATGGAGAGAGGAAAAATTGCAAGATTTAATCGACCCATCTCTACATGATTCTTACAATGAGAATCAATTTCTCAGGTGTTCTCAAATAGGACTGTCATGTGTACAAGATGAACCAGATGATCGTCCACACATGTCAAATGTGGTGACCATGCTAGACAATGAAACTACAATTCTTTCAATTCCTAAACAACCAACTTTTTTTACACGTAAAGACATATCAAGCACAGCTTCTTCAAGTCAACAGTATGATGCTACCATTCAAGAAGGTCGATAA 3042 0.3886 MSSNMRTVFLFFNLYTCWLLICSSQLCLAGDTLSAGKNITGDETIVSSRKVFELGFFTPSINGGGLESFLGIWYHIQDRSREQPQKPTVVWVANRDKPIAFNATGVFKIAEDGNLVVEDTSGNNNTYWSSNFKSKVKFSSNSSPKNKTMKLLDSGNLVLYDDENMVVKLWESFENPTDTFLPGMKMDRNLKLTSWKGDDDPGSGNFSFKMERIGDTRFVIMNRDQIYWESEEYGTLNFQVNNHESEDISSVVYSLLTNLSLPILNNTRLLLNSTGVIQWVDNSLQGESLVRWKQPNTKCLTYNVCGNFASCNDNDKVCKCLPGFNTDLLTDSSLPDKAGCTRRKSAPCTTNDTVFLNLNMIKTGRPDIKFAVEYEESCKNKCLEMCPQCQAYSYAPLPTDRRRTFNPSNCWIWTHNLTTLKEDYTNWDPNRRLIVLVDKSDIATTPRTCEPCGSNPVPYPLSTGPNCGDPTYFNFRCNPSMGQLSFTNDTTSNNISVNYRVIRVAPSSKTFTIYNEDNTFNQYCGEGSQYKGSLKISPPFRISSDNLCYEQVVISWNPPSEEPICDNSADCHGWNHSTCSKGNRCLCNANYYWSGESLNCTEMLKSSTGGKSKSSFYLILGLVLTGTVTLACIIVFAYACRRRIAHMIKKDSENVQRNTRGRFYDSERHVKDLIDMEGLEENDNEGIEVPFFDFESILIATDEFSDVNKLGKGGFGPVYKGKLGGQEIAVKRLSSVSSQGLQEFKNEVVLIAKLQHRNLVKLRGYCVKGVEKILLYEYLPNKSLDLLIFDPTKSVILDWQMRFDIVLGIARGLLYLHQDSRLRVIHRDLKTSNILLDEDMQPKISDFGLARIFGGKETEASTERVVGTYGYMSPEYALDGYFSTKSDVFSFGVVLLEIISGKRNTGFYRSKEISSLLGYAWRLWREEKLQDLIDPSLHDSYNENQFLRCSQIGLSCVQDEPDDRPHMSNVVTMLDNETTILSIPKQPTFFTRKDISSTASSSQQYDATIQEGR 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01792 1013 ProSiteProfiles Bulb-type lectin domain profile. 30 172 IPR001480 -
Vivi5g01792 1013 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 201 IPR036426 -
Vivi5g01792 1013 ProSiteProfiles Protein kinase domain profile. 704 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g01792 1013 Gene3D Phosphorylase Kinase; domain 1 671 778 - -
Vivi5g01792 1013 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 133 997 - -
Vivi5g01792 1013 SMART serkin_6 704 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g01792 1013 FunFam Receptor-like serine/threonine-protein kinase SD1-8 25 173 - -
Vivi5g01792 1013 Pfam S-locus glycoprotein domain 264 326 IPR000858 GO:0048544
Vivi5g01792 1013 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 669 778 - -
Vivi5g01792 1013 Pfam D-mannose binding lectin 88 191 IPR001480 -
Vivi5g01792 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
Vivi5g01792 1013 Pfam Protein kinase domain 705 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g01792 1013 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 779 982 - -
Vivi5g01792 1013 Gene3D - 25 174 IPR036426 -
Vivi5g01792 1013 SMART blect_4 36 176 IPR001480 -
Vivi5g01792 1013 CDD B_lectin 39 176 IPR001480 -
Vivi5g01792 1013 Gene3D Transferase(Phosphotransferase) domain 1 779 985 - -
Vivi5g01792 1013 ProSiteProfiles PAN/Apple domain profile. 348 449 IPR003609 -
Vivi5g01792 1013 SUPERFAMILY Protein kinase-like (PK-like) 686 995 IPR011009 -
Vivi5g01792 1013 CDD STKc_IRAK 710 976 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01792 Vivi-Chr5 65295682 65299854 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01792 692 989 Receptor kinase-like Gene Family AT4G11530 58.333 5.87e-120 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi5g01792 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01792 - - tpra:123882048 1486.47