Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01791 ATGTCCAGTAACATGAGAACTGTTTTTCTCTTCTTCAACCTGTATACTTGTTGGTTATTGATATGCTCTTCTCAGTTGTGTTTAGCAGGAGATACTTTGAGCGCTGGCAAGAATATTACCGGCGATGAAACCATTGTTTCATCTCGAAAAGTATTTGAACTAGGCTTTTTCACTCCCAGCATCAATGGTGGCGGTTTAGAAAGCTTCTTAGGCATATGGTATCACATACAAGATAGGTCAAGAGAACAGCCACAAAAACCAACAGTAGTGTGGGTTGCTAACAGAGACAAACCTATAGCTTTTAATGCAACTGGAGTTTTCAAAATAGCTGAGGATGGGAATCTTGTAGTTGAAGACACATCCGGTAATAACAATACCTATTGGTCATCCAATTTCAAGTCCAAAGTCAAATTCTCTTCTAATTCTTCACCAAAAAACAAGACAATGAAACTTCTGGATTCTGGGAACCTTGTGTTATATGATGATGAAAACATGGTAGTGAAACTCTGGGAGAGCTTTGAAAATCCTACTGACACATTCCTACCAGGTATGAAGATGGATAGGAATCTAAAATTAACTAGTTGGAAAGGTGACGATGACCCAGGAAGCGGGAATTTCAGTTTTAAGATGGAACGAATAGGGGACACCCGTTTCGTAATCATGAACAGAGACCAAATTTATTGGGAGAGCGAAGAGTACGGAACATTGAATTTCCAAGTAAATAATCATGAATCTGAAGACATCAGCTCAGTGGTTTACAGCTTGTTGACCAACTTAAGCTTGCCTATACTGAACAACACAAGGTTGCTCCTCAATTCAACAGGTGTGATACAATGGGTGGACAATTCCTTGCAAGGTGAATCGTTGGTACGGTGGAAGCAGCCAAACACCAAATGCTTAACATATAACGTTTGTGGAAACTTTGCTAGCTGTAACGACAATGATAAGGTATGCAAATGTTTACCTGGGTTCAACACCGATTTGTTGACAGATTCTTCTCTACCAGACAAGGCAGGTTGTACGAGGAGAAAATCAGCACCGTGTACTACAAATGATACAGTGTTCTTGAACTTGAACATGATTAAAACAGGAAGGCCAGATATAAAGTTTGCTGTAGAATATGAAGAAAGTTGCAAAAACAAGTGCCTTGAGATGTGTCCACAGTGCCAGGCCTACTCATATGCTCCACTTCCTACTGATCGCCGGCGTACTTTTAATCCTTCAAACTGTTGGATCTGGACACACAATTTAACTACTCTTAAAGAAGACTACACAAATTGGGATCCTAATCGGAGACTCATTGTCCTAGTTGATAAATCAGACATAGCAACAACTCCAAGAACTTGTGAGCCTTGTGGTTCAAACCCAGTTCCTTATCCTCTTAGTACCGGACCCAATTGTGGAGACCCCACATACTTCAACTTTAGATGCAATCCCTCGATGGGTCAACTTAGCTTCACCAATGATACCACCAGCAACAACATCAGTGTTAATTACAGAGTTATTCGTGTAGCGCCAAGTTCAAAAACGTTTACCATTTATAATGAGGATAATACTTTTAATCAATATTGTGGAGAAGGGTCTCAATACAAAGGAAGTCTTAAGATTTCTCCACCATTTCGCATTTCCAGTGACAATCTGTGCTATGAACAGGTGGTAATTAGTTGGAATCCGCCTTCGGAAGAACCCATTTGTGATAACTCTGCTGATTGCCATGGTTGGAACCATTCTACCTGTAGTAAAGGAAACAGGTGTCTTTGCAATGCAAACTATTATTGGAGTGGCGAGTCTTTAAATTGTACAGAAATGCTTAAATCGTCAACAGGAGGGAAATCTAAAAGCTCATTCTATTTGATTCTTGGATTAGTTCTTACCGGTACGGTTACTCTTGCCTGCATCATTGTTTTTGCTTATGCATGCAGAAGAAGAATAGCTCATATGATTAAGAAAGATCCAACAAAGAGCGTAATTTTAGATTGGCAAATGCGGTTTGATATAGTTCTCGGAATCGCACGTGGACTGCTCTATCTTCATCAAGATTCAAGACTTAGAGTTATTCATCGAGATTTGAAAACCAGCAACATTCTTCTGGATGAAGATATGCAACCTAAAATATCAGATTTTGGACTAGCAAGAATATTTGGAGGCAAAGAAACTGAAGCGAGCACAGAAAGGGTTGTTGGTACATATGGATATATGTCTCCTGAATATGCGTTGGATGGATATTTCTCAACAAAGTCAGATGTTTTTAGTTTTGGTGTTGTCTTGCTTGAAATCATAAGTGGAAAAAGGAACACTGGATTCTATCGGTCTAAAGAAATTTCAAGTCTTCTTGGTTATGCTTGGAGATTATGGAGAGAGGAAAAATTGCAAGATTTAATCGACCCATCTCTACATGATTCTTACAATGAGAATCAATTTCTCAGGTGTTCTCAAATAGGACTGTCATGTGTACAAGATGAACCAGATGATCGTCCACACATGTCAAATGTGGTGACCATGCTAGACAATGAAACTACAATTCTTTCAATTCCTAAACAACCAACTTTTTTTACACGTAAAGACATATCAAGCACAGCTTCTTCAAGTCAACAGTATGATGCTACCATTCAAGAAGGTCGATAA 2625 0.3912 MSSNMRTVFLFFNLYTCWLLICSSQLCLAGDTLSAGKNITGDETIVSSRKVFELGFFTPSINGGGLESFLGIWYHIQDRSREQPQKPTVVWVANRDKPIAFNATGVFKIAEDGNLVVEDTSGNNNTYWSSNFKSKVKFSSNSSPKNKTMKLLDSGNLVLYDDENMVVKLWESFENPTDTFLPGMKMDRNLKLTSWKGDDDPGSGNFSFKMERIGDTRFVIMNRDQIYWESEEYGTLNFQVNNHESEDISSVVYSLLTNLSLPILNNTRLLLNSTGVIQWVDNSLQGESLVRWKQPNTKCLTYNVCGNFASCNDNDKVCKCLPGFNTDLLTDSSLPDKAGCTRRKSAPCTTNDTVFLNLNMIKTGRPDIKFAVEYEESCKNKCLEMCPQCQAYSYAPLPTDRRRTFNPSNCWIWTHNLTTLKEDYTNWDPNRRLIVLVDKSDIATTPRTCEPCGSNPVPYPLSTGPNCGDPTYFNFRCNPSMGQLSFTNDTTSNNISVNYRVIRVAPSSKTFTIYNEDNTFNQYCGEGSQYKGSLKISPPFRISSDNLCYEQVVISWNPPSEEPICDNSADCHGWNHSTCSKGNRCLCNANYYWSGESLNCTEMLKSSTGGKSKSSFYLILGLVLTGTVTLACIIVFAYACRRRIAHMIKKDPTKSVILDWQMRFDIVLGIARGLLYLHQDSRLRVIHRDLKTSNILLDEDMQPKISDFGLARIFGGKETEASTERVVGTYGYMSPEYALDGYFSTKSDVFSFGVVLLEIISGKRNTGFYRSKEISSLLGYAWRLWREEKLQDLIDPSLHDSYNENQFLRCSQIGLSCVQDEPDDRPHMSNVVTMLDNETTILSIPKQPTFFTRKDISSTASSSQQYDATIQEGR 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01791 874 Gene3D - 25 174 IPR036426 -
Vivi5g01791 874 ProSiteProfiles Bulb-type lectin domain profile. 30 172 IPR001480 -
Vivi5g01791 874 ProSiteProfiles Protein kinase domain profile. 475 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g01791 874 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 641 843 - -
Vivi5g01791 874 PIRSF SRK 1 457 IPR024171 GO:0004674
Vivi5g01791 874 PIRSF SRK 563 653 IPR024171 GO:0004674
Vivi5g01791 874 PIRSF SRK 631 873 IPR024171 GO:0004674
Vivi5g01791 874 Pfam S-locus glycoprotein domain 264 326 IPR000858 GO:0048544
Vivi5g01791 874 SMART blect_4 36 176 IPR001480 -
Vivi5g01791 874 FunFam Receptor-like serine/threonine-protein kinase SD1-8 25 173 - -
Vivi5g01791 874 SMART serkin_6 518 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g01791 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 685 697 IPR008271 GO:0004672|GO:0006468
Vivi5g01791 874 CDD B_lectin 39 176 IPR001480 -
Vivi5g01791 874 Pfam D-mannose binding lectin 88 191 IPR001480 -
Vivi5g01791 874 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 201 IPR036426 -
Vivi5g01791 874 SUPERFAMILY Protein kinase-like (PK-like) 632 856 IPR011009 -
Vivi5g01791 874 ProSiteProfiles PAN/Apple domain profile. 348 449 IPR003609 -
Vivi5g01791 874 Pfam Protein tyrosine and serine/threonine kinase 630 835 IPR001245 GO:0004672|GO:0006468
Vivi5g01791 874 Gene3D Transferase(Phosphotransferase) domain 1 643 846 - -
Vivi5g01791 874 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 133 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01791 Vivi-Chr5 65295682 65299855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01791 633 853 Receptor kinase-like Gene Family AT4G23150 53.846 3.71e-75 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi5g01791 PK_Tyr_Ser-Thr 1.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01791 - - tpra:123882048 853.588