Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01763 ATGAGTTGGTCTTCCTTTTATCACACAGCCTCCAGGGTTTTTCATGAGTATCCATCCTGGTCTAAGTCTGTTGTTGTATGCACTATCATCAGCGGTGGAGGTCTAGCGGCATATGGTGATACCAGATCAGCATATAGTGATAGTGGTGATCAATTCCCACAAAAGAAGGTGGTGGTTCTTGGAACTGGTTGGGCTGGAACAAGTTTTGTGAAAAGCATGAAAAACTCCTCCTATGATATTCATGTTGTTTCACCGCGTAACTATTTTGCATTCACTCCTTTGTTACCTAGTGTCACTTGTGGCACAGTCGAGGCACGAAGTATCGTTGAGCCTATTCGAAATATCAGCAGAAAGAGTGGTTTAGATGTTCAATTCAGTGAAGCTGAATGCTATAAGATTGATCCAAAGAACAACAAAGTTTACTGCAAAGCTACTCATGACAAAAAGCTAGGTGGAACAGAAGAATTTTCCCTTGATTATGATTACTTAGTAATAGCTATGGGAGCTCGTTCTAATACCTTTAATACACCTGGTGTCGAGGAACATGCCTACTTCTTGAAGGAAGTGGAAGATGCTAAAAGAATCCGCCACAAAGTGATTAACCTTTTTGAAAGAGCAAGCCTTCCTTGTGTACCGGTGGAAGAGAAGAAAAAGCTTCTCAGTTTTGTAATTGTCGGTGGTGGTCCAACTGGTGTAGAGTTTGCAGCAGAGCTACATGATTTTGTGCATGAAGATCTGTCTAAGTTATATCCTTCACTTAAAGACCATGTCAAGATTACTCTCCTCGAGGCTGGCGATCATATCTTGAACATGTTTGACAAGAGAATAACAGAATTTGCTGAAGGAAAGTTCAAAAGAGATGGAATTGATGTGAAATTAGGATCTATGGTTGTGAAAGTTGGTGAAAAAGAAATCTCGTCGAAAGAAAGAGGAAGTGGTGAAATTGTTACTTTACCTCATGGGATGGTAGTTTGGTCCACTGGTATTGGTGCTCGTCCTGAAATAGTTGATTTTATGAAGCAACTTGGCCAGATTAACAGGCGCGCATTGGTGACCGATGAATGGCTGAGGGTGGAAGGATGTGACAACATCTATGCTCTAGGTGATTGTGCCACTGTTAATCAACGTAAAGTTATGGAAGATATAGCGGTGATATTTAGCAAAGCGGACAAGGACAACTCCGGAATGTTAGATCTTAAAGAATTTCAAAACGTTGTTGGAGATATTATTGAGAGGTATCCACAAGTGGACATTTATTTAAAGAGTCAAATGAAAGACATGGCTTCTTTGCTAAGTAAATCTCAGGAAAGCCCTACTACAGTTGTGGACATTGAATACTTTAAACAAGCTCTTTCCAAAGTTGATTCTCAGATGAAAAATCTTCCTGCAACCGCTCAGGTAGCTGCTCAACAAGGAACCTATCTCGCAGACTGTTTCAATCGGATGGAATTGTGCGAGAGATATCCGGAAGGCCCTCTAAGGTTTAGAGGAACCGGACGCCATAGATTTCATGCATTCAGGTACAAGCATTTGGGACAATTTGCTCCTCTTGGAGGAGAACAAACTGCAGCTCAACTTCCAGGAGATTGGGTTTCAATTGGTCATAGCAGTCAGTGGTTGTGGTATTCAGTATATGCAAGCAAACTAGTCAGCTGGAGAACAAGAGCTTTGGTGATATCTGATTGGGGAAGACGATTCATATTTGGCAGAGACTCAAGTCAAATCTGA 1728 0.4132 MSWSSFYHTASRVFHEYPSWSKSVVVCTIISGGGLAAYGDTRSAYSDSGDQFPQKKVVVLGTGWAGTSFVKSMKNSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRNISRKSGLDVQFSEAECYKIDPKNNKVYCKATHDKKLGGTEEFSLDYDYLVIAMGARSNTFNTPGVEEHAYFLKEVEDAKRIRHKVINLFERASLPCVPVEEKKKLLSFVIVGGGPTGVEFAAELHDFVHEDLSKLYPSLKDHVKITLLEAGDHILNMFDKRITEFAEGKFKRDGIDVKLGSMVVKVGEKEISSKERGSGEIVTLPHGMVVWSTGIGARPEIVDFMKQLGQINRRALVTDEWLRVEGCDNIYALGDCATVNQRKVMEDIAVIFSKADKDNSGMLDLKEFQNVVGDIIERYPQVDIYLKSQMKDMASLLSKSQESPTTVVDIEYFKQALSKVDSQMKNLPATAQVAAQQGTYLADCFNRMELCERYPEGPLRFRGTGRHRFHAFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKLVSWRTRALVISDWGRRFIFGRDSSQI 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01763 575 SUPERFAMILY EF-hand 373 461 IPR011992 -
Vivi5g01763 575 SMART efh_1 381 409 IPR002048 GO:0005509
Vivi5g01763 575 ProSitePatterns EF-hand calcium-binding domain. 390 402 IPR018247 -
Vivi5g01763 575 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 46 406 - -
Vivi5g01763 575 ProSiteProfiles EF-hand calcium-binding domain profile. 377 412 IPR002048 GO:0005509
Vivi5g01763 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 160 178 - -
Vivi5g01763 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 349 371 - -
Vivi5g01763 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 57 76 - -
Vivi5g01763 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 221 239 - -
Vivi5g01763 575 PANTHER NADH DEHYDROGENASE 50 575 IPR045024 GO:0003954|GO:0006116
Vivi5g01763 575 Pfam Pyridine nucleotide-disulphide oxidoreductase 55 380 IPR023753 GO:0016491
Vivi5g01763 575 SUPERFAMILY FAD/NAD(P)-binding domain 55 273 IPR036188 -
Vivi5g01763 575 Gene3D - 440 574 - -
Vivi5g01763 575 Gene3D - 48 404 - -
Vivi5g01763 575 SUPERFAMILY FAD/NAD(P)-binding domain 214 374 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01763 Vivi-Chr5 63120540 63123524 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01763 5 575 Chloroplast and Mitochondria Gene Families AT4G21490 68.858 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01763 K03885 - gmx:100820044 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01763 5 63120540 63123524 Vivi5g04216 5 139023622 139028580 PCT