Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01742 ATGGAGAAAATGGCGAATGGGTTGGAAAAAGTGAGTGGGTTGTCAATGTTCAGCGAGGAAGAGCTCAGAGAAATGAGTGGGGTGAAGCTTCTTGACGACTATGTTGAAGTCACGTGTGGGTGTACCAGTCATAGATACGGTGATGCTGTTGGTAGGCTTAGGGTTTTTCTTAATGGCTATCTTCAAATTATTTGTGAATGCACCCCTGGTTGTCAAGAAGACAAATTGACTCCTGCTGCATTTGAGAAACACTCTGGAAGAGAGACAGCAAGGAAATGGAAGAATAACATCTGGGTTATAGTTAATGGCGAGAAGGTTCCATTGTGTAAAACGGTGCTGCTCAAATACTATAATCAAGTATCAAAAGCTGCTAATAGCTCTCAGAGATCCCAAAATGGCCGGGTTGGTCACCGTGATGAGTTTGTTCGCTGTACTAGGTGCAACAAAGAGCGTAGATTTCGTCTGAGATCTAAAGATGAATGTCGCATTCACCATGATGCTGTGGCAGATGCAAACTGGAAATGTTCTGATCTTCCATATGACAAGATAACATGTGACGATGAAGAAGAACGGGGAAGTCGAAGAGTTTACCGAGGATGTGGTCGGTCTCCAACGTGCAAAGGTTGCACTTCTTGTGTGTGCTTTGGATGTGACATCTGCCGGTTTTCAGATTGCAGCTGTCAGACATGTACTGACTTTACTAGCAATGTAAGAGCTTGA 720 0.4389 MEKMANGLEKVSGLSMFSEEELREMSGVKLLDDYVEVTCGCTSHRYGDAVGRLRVFLNGYLQIICECTPGCQEDKLTPAAFEKHSGRETARKWKNNIWVIVNGEKVPLCKTVLLKYYNQVSKAANSSQRSQNGRVGHRDEFVRCTRCNKERRFRLRSKDECRIHHDAVADANWKCSDLPYDKITCDDEEERGSRRVYRGCGRSPTCKGCTSCVCFGCDICRFSDCSCQTCTDFTSNVRA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01742 239 ProSiteProfiles SAND domain profile. 20 108 IPR000770 GO:0003677
Vivi5g01742 239 PANTHER PROTEIN ULTRAPETALA 1 15 238 IPR020533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01742 Vivi-Chr5 62183675 62187713 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Vivi5g01742 SAND 0.00012 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01742 - - gmx:100796203 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01742 5 62183675 62187713 Vivi5g01742 5 62183675 62187713 ECH