Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01730 ATGGATTGGAAGAGAACTACTTTGAAGAACTATGGACTGGTTTTATTGGGATTTTTGTTGATATGTGTAATTCAGATTTCAAATGCTCTCACTGATCCCACGGATGTTGCTGCACTTAATAGCTTACATGCTTCACTGGGATCTCCTCTTCTACCTGGATGGGTTTCAAGTGGTGGAGATCCATGCGGAGAAGGGTGGCAAGGCATTCAATGTAATGGTTCCTTCATACAAAAAATTGTTCTGAATGGTGCAAATTTGGGAGGAGAACTCGGTGATAGTCTGGCAACATTTGTTACAATCTCAGTAATCGATCTGAGTAACAATAACATTGGAGGAAGTATTCCGTCCAGTTTGCCAGTTACGATGAGAAACTTTTTTCTTTCAGACAACCTGTTTACCGGAAGTATTCCAACGTCTTTAGCCACTTTAAGCGGAATGACAGACATGTCTCTTAACAACAATCATTTAACTGGAGAAATACCAGATGCGTTTCAGTCATTTACACAATTGATCAATCTAGATTTATCTAGTAATAATCTGAGTGGGGAACTGCCTCCTTCGGTGGAGAATTTGTCATCTTTGACCACCCTACGCTTGCAGGATAATCAACTATCTGGGACACTTGATGTTTTACAAGACCTTCCTCTGAAAGATTTGAATGTCGAGAACAACCAATTTGTTGGCCCAATACCTCCAAAGCTGCTAAGTATCCCTAACTTCAGACAAGCTGGAAATCCATTTAATGATAATACCACGGTAACTCCTGCTCCTCCACCTCGCTCCCCAGTAACAGCACCGCCAGGAGCACCTCCCGGAGAACCTTCAGGAGCACCTCCAGGAACACCGCCAGGAGCACCATTTTTTGTTGTACCATCTGGTCCTGGTCGTGTACCTCCTAAAAAGGCTGATGGACCAACTGCAGCGGTTGAGTCAAATTCTGGGAAATCAAACAAACATACCAAAAGGGTAGTTTTAATATCTATTGGCAGTGTTTTGGCATTCATAATTTTGGTACTAGCACTCGTTCTATTTATTCCAAGATGTGGTAAAAGGGAACGAGTTGACCGAAGGTCCAAACGACATCAAATTGGTGCTTTTGGAGGTGAAAGGCAACAAAATCCTAGGGATTTAGGGGCTATAGTCCTACCACCTAATCAAACAGACAAAGTACCGACCCGTGATGTCTTGAGGCCAAATAACGACCGCCAAGAAGAGCCTAGGAGAGCGTGGGCTGTTCCGATTCCAAATGCACAGGATAAGAAAGAGAAGGATGTGCCAAGAATGGCGACAATACCAAAGCCGAGAGATCATGAGATTGATATGAGTACACCAGAAGTATATTTTGTGCCTCCGCCGCCGCCGCCGCCGCCCCCTCCTCCTCCGCCACCGCCACCCCCACCTCCTCCTCCCCCTCCTACTATGAGGATGATTGTTGAGCCAGCCATTCCCCACAGAGGGACTAATGTTAATCCATCCTTAAGAAGTTCAATTTTTCCTCCTACTTTTGCAAAATCTTTCACCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGAAAATCTTATAGGAGGAGGCATGTTGGGCACTGTGTACAGGGCAGAGCTTCCTGATGGGAAGTTGTTTGCTGTAAAGAAACTAGACAAAAGAACCTCTGTTCACCAGAAGGATGATGAGTTTCTTGAATTGATTAATAATATTGACAGAATAAGACATACAAATATTGTTGAGCTTATTGGATACTGTTCAGAGCATGGACAAAGGCTTCTGATCTATGAGTACTGCAGTAACGGGTCACTATATGATGTACTCCACTCAGATGATGAATTCAAAGCAACACTATCATGGAATACTCGCATTCGGATGGCACTTGGTGCAGCTAGAGCCTTAGAATATTTGCATGAGCAATGTCAGCCCCCTGTGGTACACAGAAATTTGAAGTCCGCCAATGTTCTCCTTGATGATGATCTATCTGTGCGTGTATCTGATTGTGGTTTAGCTCCATTAATAGCTTCAGGTTCTGTAACTCAGCTCTCGGGTAACCTGCAATCAGCTTACGGTTATGGAGCTCCAGAGTTTGAATCAGGAACTTACACTTACCAAAGTGACGTTTACAGTGTTGGAGTTGTTATGTTAGAACTTTTAACCGGCCGTCAGTCCCATGACAGCACACGTCCACGAGGGGAGCAATTTCTTGCTAGATGGGCGATTCCCAAACTTCACGATATCGATGCATTATCAAAAATGGTCGACCCTTCTTTAAATGGAGTTTACCCTGCAAAGTCATTGTCAAATTTCGCAGACATTATTTCACGATGCCTTCAGCCGGAGCCTGAATTTAGACCAGCAATGTCAGAAGTTGTCTTATACTTACTAAATATGATAAAGAGGGAGTCTCAGAAAAGTGATTCAAATGAAAAATGA 2427 0.4335 MDWKRTTLKNYGLVLLGFLLICVIQISNALTDPTDVAALNSLHASLGSPLLPGWVSSGGDPCGEGWQGIQCNGSFIQKIVLNGANLGGELGDSLATFVTISVIDLSNNNIGGSIPSSLPVTMRNFFLSDNLFTGSIPTSLATLSGMTDMSLNNNHLTGEIPDAFQSFTQLINLDLSSNNLSGELPPSVENLSSLTTLRLQDNQLSGTLDVLQDLPLKDLNVENNQFVGPIPPKLLSIPNFRQAGNPFNDNTTVTPAPPPRSPVTAPPGAPPGEPSGAPPGTPPGAPFFVVPSGPGRVPPKKADGPTAAVESNSGKSNKHTKRVVLISIGSVLAFIILVLALVLFIPRCGKRERVDRRSKRHQIGAFGGERQQNPRDLGAIVLPPNQTDKVPTRDVLRPNNDRQEEPRRAWAVPIPNAQDKKEKDVPRMATIPKPRDHEIDMSTPEVYFVPPPPPPPPPPPPPPPPPPPPPPPTMRMIVEPAIPHRGTNVNPSLRSSIFPPTFAKSFTIASLQQYTNSFSQENLIGGGMLGTVYRAELPDGKLFAVKKLDKRTSVHQKDDEFLELINNIDRIRHTNIVELIGYCSEHGQRLLIYEYCSNGSLYDVLHSDDEFKATLSWNTRIRMALGAARALEYLHEQCQPPVVHRNLKSANVLLDDDLSVRVSDCGLAPLIASGSVTQLSGNLQSAYGYGAPEFESGTYTYQSDVYSVGVVMLELLTGRQSHDSTRPRGEQFLARWAIPKLHDIDALSKMVDPSLNGVYPAKSLSNFADIISRCLQPEPEFRPAMSEVVLYLLNMIKRESQKSDSNEK 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01730 808 Gene3D Phosphorylase Kinase; domain 1 487 595 - -
Vivi5g01730 808 Gene3D Transferase(Phosphotransferase) domain 1 596 808 - -
Vivi5g01730 808 MobiDBLite consensus disorder prediction 365 409 - -
Vivi5g01730 808 MobiDBLite consensus disorder prediction 444 475 - -
Vivi5g01730 808 MobiDBLite consensus disorder prediction 446 475 - -
Vivi5g01730 808 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 32 260 - -
Vivi5g01730 808 MobiDBLite consensus disorder prediction 252 293 - -
Vivi5g01730 808 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Vivi5g01730 808 SUPERFAMILY Formin homology 2 domain (FH2 domain) 462 471 - -
Vivi5g01730 808 SUPERFAMILY L domain-like 31 239 - -
Vivi5g01730 808 MobiDBLite consensus disorder prediction 238 318 - -
Vivi5g01730 808 Gene3D Ribonuclease Inhibitor 30 255 IPR032675 -
Vivi5g01730 808 ProSiteProfiles Protein kinase domain profile. 518 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g01730 808 Pfam Protein tyrosine and serine/threonine kinase 521 790 IPR001245 GO:0004672|GO:0006468
Vivi5g01730 808 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 596 806 - -
Vivi5g01730 808 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 802 IPR046959 -
Vivi5g01730 808 SUPERFAMILY Protein kinase-like (PK-like) 494 792 IPR011009 -
Vivi5g01730 808 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 485 595 - -
Vivi5g01730 808 MobiDBLite consensus disorder prediction 394 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01730 Vivi-Chr5 61691329 61698169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01730 21 803 Strubbelig Receptor Gene Family AT4G03390 59.647 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Vivi5g01730 PK_Tyr_Ser-Thr 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01730 - - mtr:25492087 1278.85