Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01727 ATGAATGCATGCTCAGATGCGTTGGATGAGCTGGCAGGATTGATCAAGGGGCTACTGAAGCGAGGAAGCATGGCTTATGATGAGCGCGCAAACACTGGATCCAAGGAACTTAAACTTGCTGACGCGCGTTTTCTGGCCAATCAGGGCCTGCCAGGCTTCGTCTTCTTCCTCCCTTCCGTTGCTAAAGCTCCTGCAACTGTAGTATTTAGTGCATTCATCAAAGCTTCTTCAAGTAAACTTTATTTTTCACATTCCATACAAGGAAAGACGCCGCACCGCATCATACCGCATATATCATATATCATCATCATCATGGAGGTAACAATTGAGTATCTTTACGCAGTTGTTGCTGGTGTTTTGAGCATACTACTAGTTACTTATTCTGTGTTCTTTAGAGGTGAAGCACAGCCACGACCCAAGCTTGCACCTTTAGCTTCTGGTGGATGGCCTTTGATCGGCCACCTTCATCTCCTAGGCGGTTCAAAGCAGCCTCCATACATAACCTTAGGAGACTTAGCAGACAAATACGGACCAATCTTCACCCTTCGAATCGGTGTTCACAAAGCCGTTGTGGTAAGCACTTGGGAGTTAGCCAAGGAGATTTTCACCACACACGATGTCATAATCTCGTCCCGTCCAAAATTCACCGCCGCAAAAATATTAGGACACGACTACGCTAATTTTGGATTCTCTCCTTATGGAAATTACTGGCAAAGGATGCGTAAGGTCACGGCTTCAGAGTTGTTATCTGTTCGGAGATTTGAATTGCTTGGTGATATTAGAGACTCGGAGGTGAAGAAATCGTTGGCAGAGATTTATAACAACGATGGATTTGATGAGTCTGGTGATTTAAAAGTGGAGATGAAACAGTTGTTGGGAGATATGAACTTGAACGTGATTATGAGGATGATTGGTGGGAAGAGATATTCGAGTGATGGTGGTGATGAGAGAGAGGTGAGGAAGGTGAGGTGGGTTTTCAGAGAGTTTTTTCGGTTGACAGGTTTGTTTGTGGTTGGAGATGCGATTCCGTTTCTTGGATGGCTTGATCTGGGAGGACATGTGAAGGAGATGAAGAAAGCTGAGCGTGAGATGGATAGTGTTGTTTGTGGATGGTTGGAAGAACATCGCAGGAAAAATAATGATTTGGGAGAGATTGCTAAGAATGAGCAGGATTTCATTGATGTTTTGTTGTCTGTTCTGGATGGTGTTGATCTTGATGGTTATGATCTTGATACTGTCGTCAAAGCCACATGCTTGACGTTAATTGCCGGGGCAACGGACACAACAACAGTAACAATAACATGGGCACTCTCATTACTGCTGAACAATCGCCACACATTGAAGAAAGTTCAAGATGAATTAGACGAAAAAGTTGGAAAAGAAAGGCTAGTGAATGAATCAGACATAAACAACTTAGTTTACCTTCAAGCCGTGGTAAAAGAAACACTCCGACTATATCCTGCTGGACCATTCTCAGGTGCGCGTCAATTCACTGAAAATTGTACCGTAGGCGGATACCATATTCAAACAGGTACTAGACTGATTTTGAACCTTTGGAAAATGCATAGAGATCCACGCGTGTGGTCGGAACCATTAGAGTTTCAACCAGAAAGGTTTTTGAATACTCATAAGGATGTTGATGTGAAAGGGCAACATTATGAGCTGCTTCCATTTGGAGGTGGAAGAAGGTCTTGTCCTGGGATAACATTTGGTCTTCAAATGACACATTTGGCATTAGCTGCTTTCTTGCAAGCGTTTGAAATCGCAACTCCGTCGAATGGTAATGTTGATATGAGTGCGACGTTTGGACTCACAAATATCAAAACCACCCCGCTTGAGGTTATAGTGAAACGCCGTTTGCCATACGAGCTCTTTGTTAGTGAAAATTAG 1890 0.4354 MNACSDALDELAGLIKGLLKRGSMAYDERANTGSKELKLADARFLANQGLPGFVFFLPSVAKAPATVVFSAFIKASSSKLYFSHSIQGKTPHRIIPHISYIIIIMEVTIEYLYAVVAGVLSILLVTYSVFFRGEAQPRPKLAPLASGGWPLIGHLHLLGGSKQPPYITLGDLADKYGPIFTLRIGVHKAVVVSTWELAKEIFTTHDVIISSRPKFTAAKILGHDYANFGFSPYGNYWQRMRKVTASELLSVRRFELLGDIRDSEVKKSLAEIYNNDGFDESGDLKVEMKQLLGDMNLNVIMRMIGGKRYSSDGGDEREVRKVRWVFREFFRLTGLFVVGDAIPFLGWLDLGGHVKEMKKAEREMDSVVCGWLEEHRRKNNDLGEIAKNEQDFIDVLLSVLDGVDLDGYDLDTVVKATCLTLIAGATDTTTVTITWALSLLLNNRHTLKKVQDELDEKVGKERLVNESDINNLVYLQAVVKETLRLYPAGPFSGARQFTENCTVGGYHIQTGTRLILNLWKMHRDPRVWSEPLEFQPERFLNTHKDVDVKGQHYELLPFGGGRRSCPGITFGLQMTHLALAAFLQAFEIATPSNGNVDMSATFGLTNIKTTPLEVIVKRRLPYELFVSEN 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01727 629 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01727 629 PRINTS P450 superfamily signature 424 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01727 629 PRINTS P450 superfamily signature 556 565 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01727 629 Gene3D Cytochrome P450 138 623 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01727 629 Pfam Cytochrome P450 148 601 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01727 629 PRINTS E-class P450 group I signature 197 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01727 629 PRINTS E-class P450 group I signature 517 541 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01727 629 PRINTS E-class P450 group I signature 295 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01727 629 PRINTS E-class P450 group I signature 476 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01727 629 PRINTS E-class P450 group I signature 433 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01727 629 PRINTS E-class P450 group I signature 173 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01727 629 PRINTS E-class P450 group I signature 555 565 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01727 629 PRINTS E-class P450 group I signature 413 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01727 629 PRINTS E-class P450 group I signature 565 588 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01727 629 CDD CYP82 177 619 - -
Vivi5g01727 629 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 558 567 IPR017972 GO:0005506|GO:0016705
Vivi5g01727 629 FunFam Cytochrome P450 82C4 132 617 - -
Vivi5g01727 629 PANTHER CYTOCHROME P450 82C3-RELATED 119 624 - -
Vivi5g01727 629 SUPERFAMILY Cytochrome P450 148 619 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01727 Vivi-Chr5 61597051 61617128 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01727 122 626 Cytochrome P450 AT4G31940 47.969 1.80e-171 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01727 - - vvo:131604729 1220.3