Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01721 ATGGAAATGCCTGCGAGAAGATCTAATTACTCGGTACTGAGTCAAGTTCCGGACGATCCGTTTTCGTATGCCGCCGGCGGTAGTGCTCCGTCGACTTCGAGCGACGGGAAAGCGAGCCGTGGCGGAAAGATGGATAGAGGTTTAGGTTTTGATTGGGAGTTAGTTGGCGATCATAGGTTGACTCAGCAAGGGAACAATCGGATCGGGAATTTGTACTCTTCTATCGGGTTACAGAGGCAATCGAGCGGGAGTAGTTACGGTGAAAGCTCGTTGTCTGGTGGAGGGGAGTACTATGCGCAGACGCTGTCGACGGCGGCGGCTAGTGAGGTGGATGCATTTGGATATTTGCAGGAGGATGGATTTAAGGTTGGTGAGGTGAGGAATCAGTTGTCTGAGGGGCCGGGGTGGACGGGTGGATCTTCCGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTATCAGTTGCAGCTTGCGTTGGCGTTGAGGCTGTCGTCGGATGCTACTTGTGCGGATGATCCGAATTTTCTGGATCCGGTGCCGGAAGAAGGTTCTTTGAGGTTATCGTCTTCGCCGGAGGCTTTGTCTCATAGATTCTGGGTGAATGGCTGCCTATCGTACTCTGATAAAATCCCCGATGGATTTTACTTAATTCATGGGATGGATTCCTATGTCTGGACTGTGTGCACTGATCTGCAGGAAAACAGCCGAATCCCATCAGTTGATACTCTAAAGTCTGTGCATCCCCGCATCGATTCTTCCCTTGAAGTAGTTTTAGTGGATCGGCACCATGATGCCAGCTTGAGAGAACTGCAAAACATAGTTCAAGACATTTCTTGTAGCAGCATAACAACAACAGAGGTTGTGGATCAGCTTTCGAAGCTGGTTTGCAACCGCATGGGGGGTTCAGCTTCTGCTGGGGAGGATACATTTCTTTCTTTCTGGAGAGATTGCAGTAATAACCTGAAAGATTGCTTAGGATCTGTTGTTTTTCCCATAGGTAGTCTATCTGTTGGCCTCTGCAGGCATCGTGCCATATTATTCAAAGTACTAGCTGATGCCATTGATTTACCATGTCGAATTGCAAAGGGATGTAAATATTGCAAAAGAGATGATGCTTCTTCTTGTCTTGTTCGATTTGGGCTTGAGAGGGAATATCTTGTTGATTTAATTGGGAAGCCAGGACACTTATGCGAACCTGATTCTTTGCTGAACGGTCCATCTTCCATCTCATTTTGTTCACCCTTGCGCTTTCCAAGACTTAAATCAGCTGAAACTACAATTGATTTCAGGTCACTTGCCAAACAGTATTTCTCAGACTGTTTATCTCTTGAGCTTTTCTTCGACAACAGTTCTGCAGAACAGTTCGATGGGAAATGCAATGAAAGGAATAACCTTAAGCCAATTTCGAGTGACATTAACAGAAGTTCTCAACTTCCTTTGTATCCGCAATCTGCTCTTCCGAGCACACATGATCAAGCTTCTGAAACATATATGTTATGTAACCCTCCTCAGAACTATATAGACTCGACAACTGTGGGCAAGTATCCACCTCCTTTAAAGCATAAGCGTCCTGTTTATATTGCCAATGATGATGTCATTGAGGGTAGGAGGTTTGTCGAAGGAAGTCAACTGATTCCTAGCAAGCCTACTCGAGAAGTTGCCTTTGACATGGAGGATTTAGCTATACCCTGGAATGATCTTAATTTAAAAGAAAAAATAGGATCAGGTTCTTTTGGAACTGTGCATCGTGCTGAGTGGAATGGCTCGGATGTTGCTGTGAAAATTTTGATGGAGCAAGATTTTCATGCTGAACGCTTCAAAGAATTCATGAGGGAGGTTGCAATAATGAAACATTTGCGGCATCCAAACATTGTTTTATTAATGGGGGCAGTCACTCAACCTCCTAACTTATCAATTGTCACAGAATATTTATCAAGGGGTAGCTTATATAGGCTGTTGCATAGACCTGGTGCCAAGGAAGTTTTGGATGAAAGGCGTAGGCTTAGTATGGCTTACGACGTGGCAAAGGGGATGAATTATCTTCACAAACGCAATCCCCCAATTGTTCATAGAGATCTGAAATCTCCAAATCTTCTTGTTGACAAGAAATACACTGTGAAGGTTTGTGATTTTGGGCTTTCCCGCTTAAAGGCCAATACATTTCTCTCTTCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGTGACGAGCCATCAAATGAGAAGTCTGATCTTTACAGCTTTGGGGTAATCATGTGGGAGCTTGCAACATTGCAACAGCCGTGGGGTAATTTGAATCCAGCACAGGTTGTTGCTGCTGTTGGCTTCAAGGGAAAAAGGCTCGAGATCCCACGAGAGTTGAATCCCCAAATAGCTGCAATAATTGAGGCTTGCTGGGCCAATGAGCCCTGGAAACGCCCTTCTTTTGCCAGCATTATGGATTCTTTGAGGTCATTACTCAAACCCCCTACACCTCAACCTGGTATTCCAAACATGCCGCCTCTCACCTGA 2526 0.4568 MEMPARRSNYSVLSQVPDDPFSYAAGGSAPSTSSDGKASRGGKMDRGLGFDWELVGDHRLTQQGNNRIGNLYSSIGLQRQSSGSSYGESSLSGGGEYYAQTLSTAAASEVDAFGYLQEDGFKVGEVRNQLSEGPGWTGGSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPEEGSLRLSSSPEALSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENSRIPSVDTLKSVHPRIDSSLEVVLVDRHHDASLRELQNIVQDISCSSITTTEVVDQLSKLVCNRMGGSASAGEDTFLSFWRDCSNNLKDCLGSVVFPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCKRDDASSCLVRFGLEREYLVDLIGKPGHLCEPDSLLNGPSSISFCSPLRFPRLKSAETTIDFRSLAKQYFSDCLSLELFFDNSSAEQFDGKCNERNNLKPISSDINRSSQLPLYPQSALPSTHDQASETYMLCNPPQNYIDSTTVGKYPPPLKHKRPVYIANDDVIEGRRFVEGSQLIPSKPTREVAFDMEDLAIPWNDLNLKEKIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFKEFMREVAIMKHLRHPNIVLLMGAVTQPPNLSIVTEYLSRGSLYRLLHRPGAKEVLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDLYSFGVIMWELATLQQPWGNLNPAQVVAAVGFKGKRLEIPRELNPQIAAIIEACWANEPWKRPSFASIMDSLRSLLKPPTPQPGIPNMPPLT 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01721 841 SUPERFAMILY Protein kinase-like (PK-like) 542 820 IPR011009 -
Vivi5g01721 841 FunFam Serine/threonine-protein kinase CTR1 646 831 - -
Vivi5g01721 841 MobiDBLite consensus disorder prediction 21 42 - -
Vivi5g01721 841 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 156 825 - -
Vivi5g01721 841 PRINTS Tyrosine kinase catalytic domain signature 641 654 IPR001245 GO:0004672|GO:0006468
Vivi5g01721 841 PRINTS Tyrosine kinase catalytic domain signature 792 814 IPR001245 GO:0004672|GO:0006468
Vivi5g01721 841 PRINTS Tyrosine kinase catalytic domain signature 682 700 IPR001245 GO:0004672|GO:0006468
Vivi5g01721 841 PRINTS Tyrosine kinase catalytic domain signature 748 770 IPR001245 GO:0004672|GO:0006468
Vivi5g01721 841 PRINTS Tyrosine kinase catalytic domain signature 729 739 IPR001245 GO:0004672|GO:0006468
Vivi5g01721 841 Pfam Protein tyrosine and serine/threonine kinase 567 821 IPR001245 GO:0004672|GO:0006468
Vivi5g01721 841 Pfam Ethylene-responsive protein kinase Le-CTR1 192 397 - -
Vivi5g01721 841 SMART serkin_6 567 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g01721 841 ProSiteProfiles Protein kinase domain profile. 567 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g01721 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672|GO:0006468
Vivi5g01721 841 ProSitePatterns Protein kinases ATP-binding region signature. 573 594 IPR017441 GO:0005524
Vivi5g01721 841 Gene3D Phosphorylase Kinase; domain 1 560 645 - -
Vivi5g01721 841 FunFam Serine/threonine-protein kinase isoform 1 557 645 - -
Vivi5g01721 841 Gene3D Transferase(Phosphotransferase) domain 1 646 830 - -
Vivi5g01721 841 CDD STKc_MAP3K-like 573 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01721 Vivi-Chr5 61415481 61424105 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01721 1 832 MAP Kinase Kinase Kinase AT5G03730 64.808 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Vivi5g01721 PK_Tyr_Ser-Thr 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01721 K14510 - gmx:100775768 1350.5