Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01648 ATGGCTTCTGGATCGTCTGGTCGCAGTAACCCCGCTTCTAAAGGCTTTGATTTTGCTTCTGATGACATCTTATGCTCCTACGAAGACTTTTCCAACAGGGATTCCAATTCCAATGGCAATCACAACGATCCTGCAATCGCCCCTAATTCAACCAAGGATTTTCACAAATCAAGGATAGCAAGGACATCCGTTTTTCCTGCTACTGCTGCCTATAATCCACCTGAAGATTCTTTAAGCCTAGACGTGATTGCAACTGTTGAGAATAGCATGAAGAAATATGCGGACAATCTCATGCGATTTCTCGAGGGAATTAGTTCAAGGCTATCACAGTTGGAATTATATTGCTACAATCTTGACAAATCTATTGGAGAAATGAGATCTGATTTAAATCGTGACCATGGGGAGCAAGATTCAAAGCTCAAATCTCTTGAAAAGCATCTTCAGGAAGTTCACCGGTCAGTACAAATTTTAAGAGACAAGCAAGAGTTAGCTGAGACTCAGAAAGAACTAGCCAAGCTTCAACTTGCTCAGAAGGAATCATCTTCCTCAAGCCATTCACAGTCCAATGAGGACAGATCCTCACCTGCAGATCCTAAAAAAACTGATAATGCATCTGATGCGAACAACCATCAGTTAGCTCTTGCCCTGCCTCATCAAATTGCTCCTCAGCAGCTGCCTGCAGGACCCCCGGCCCAAGCTCCACCACCAAATGTGAATCAACCCACTCAACAACCTGCTTATTACATGCCGCCTGCTCCTGCAGCGTCTCAGCTCCCCCAGAATCAGTATATGCCTTCTGATCAACAATACCGAACCCCCCAACTACAAGACATGTCCCGGGTGGCTCCACAACCAACACCATCTCAAGTAAACCCTCCCACACCTGTGCAACAATTTTCTCAGTATCAGCAGCAGCCGCAGCAATGGCCTCAGCAGGGTCAACAACCCTCAATGCAACCTCAAATGAGACCCCCCTCATCAACTGTGTATCCTCCATATCAGTCAAGCCAAGTATCTAATCCATCATCCGCAGATACACAGCCAACCAGCATGCCCATGCAAATGCCATATTCAGGGGTTCCGCAACCTGGATCCAGCCGTGCTGATTCCATGCAATATGGATATGGTGGAACTGGTAGAACAGTTCCTCAGCAACCCCCACCCCAGCAAATCAAGAGTTCATTTCCTTCACAACCAGGTGACGTGTATGGAGCTAGCGGGACACACCAGACACTCCCCCCTCCTCCTGGTAATGCATATATAATGTATGATGGTGGTGAGGGTGGAAGGACACATCATCCACCATCTCAACCCTCACATTTTGCTCAATCTGGATATCCTCCAACAAGTGCTTCCCTTCAGAACCCTAATCTCATGGTTCGAAATCCTAACCAGTCACAGTTTGTGCGCAACCATCCTTACAATGAGTTGATTGAGAAATTGGTGAACATGGGATTCAGGGGTGACCATGTGGCGAGTGTGATACAAAGGATGGAGGAAAGTGGACAAACCATAGATTTCAATTCTGTTCTTGACAGGTTGAATGTGCATAGCTCTGTTGGCCCCCAAAGAGGATGGTCAGGGTGA 1587 0.4675 MASGSSGRSNPASKGFDFASDDILCSYEDFSNRDSNSNGNHNDPAIAPNSTKDFHKSRIARTSVFPATAAYNPPEDSLSLDVIATVENSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLNRDHGEQDSKLKSLEKHLQEVHRSVQILRDKQELAETQKELAKLQLAQKESSSSSHSQSNEDRSSPADPKKTDNASDANNHQLALALPHQIAPQQLPAGPPAQAPPPNVNQPTQQPAYYMPPAPAASQLPQNQYMPSDQQYRTPQLQDMSRVAPQPTPSQVNPPTPVQQFSQYQQQPQQWPQQGQQPSMQPQMRPPSSTVYPPYQSSQVSNPSSADTQPTSMPMQMPYSGVPQPGSSRADSMQYGYGGTGRTVPQQPPPQQIKSSFPSQPGDVYGASGTHQTLPPPPGNAYIMYDGGEGGRTHHPPSQPSHFAQSGYPPTSASLQNPNLMVRNPNQSQFVRNHPYNELIEKLVNMGFRGDHVASVIQRMEESGQTIDFNSVLDRLNVHSSVGPQRGWSG 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01648 528 MobiDBLite consensus disorder prediction 33 47 - -
Vivi5g01648 528 MobiDBLite consensus disorder prediction 173 191 - -
Vivi5g01648 528 MobiDBLite consensus disorder prediction 436 452 - -
Vivi5g01648 528 MobiDBLite consensus disorder prediction 293 388 - -
Vivi5g01648 528 MobiDBLite consensus disorder prediction 255 285 - -
Vivi5g01648 528 Pfam UBA-like domain (DUF1421) 474 518 IPR010820 -
Vivi5g01648 528 MobiDBLite consensus disorder prediction 223 241 - -
Vivi5g01648 528 MobiDBLite consensus disorder prediction 222 414 - -
Vivi5g01648 528 MobiDBLite consensus disorder prediction 33 53 - -
Vivi5g01648 528 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 4 528 - -
Vivi5g01648 528 MobiDBLite consensus disorder prediction 426 452 - -
Vivi5g01648 528 Coils Coil 140 176 - -
Vivi5g01648 528 MobiDBLite consensus disorder prediction 173 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01648 Vivi-Chr5 55292888 55299762 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01648 473 514 Trihelix Transcription Factor Family AT3G01560 38.095 3.90e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01648 - - gmx:100782994 698.353