Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01615 ATGGCCAAGAAGAAGAAGAGCTGGTTTAATCTGGTGAAGAGGCTTTTCATATGGGAAACTCATTCCACACAAGAAAAGAAAGAGAAAAGAAGGAAATGGATATTTGGAAAGCTAAAAACCAAGAAGTTACCTTCAATTACAGCTCCAACAACAACAACAAATGAAGCAGAAGAGGAGGAAAAAAGCAAGCATTCTCAAGTTATGCTTAATGAAGTTTCACAATCTGCTTATCAGAAAAATCAAGATAGCTCAGAGGAATCTGAACCTGTTAAAACAAGGAATGGTGTTCCTCAATCGGTATATCTGTACCAGATGGAGATTCAAGAATTTGCAGCCATCAAAATTCAAACTGCCTTTAGGGGCTACCTGGCAAAGAAGGCTCTGAGGGCATTGAAAGGAATAGTGAAACTTCAAGCGATTATTCGTGGGCGAGCAGTGAGACGCCAAGCTATGAGTACTCTCAAGAGCTTGCAGTCCATTGTAAGTATTCAATCAAAGATATGTGCAAGGAGACTCCAAATGGTTGAAGGAAGATGGGATTCTGTTGAAGATGAAGAGATTCATTATTCTAAAGACAAGATCATTAGGATGGACTCCAACAGTGAACGAAAGTGGGATGACAGCACTTTATTGAAAGAAGAGGTAGATGCTTCTTGCATGATCAAGAAAGAAGCCATTATTAAGAGAGAAAGAATAAAAGAATACACATTTAATCATAGAAGATCAGCAGAGTCCGAAAGAGGTAAAGTGAATGGAAGATGGAGGTACTGGCTAGAGCAATGGGTAGATACACAGCTTTCTAAAAGCAAAGAGCTTGAAGATTTAGACTCAGTTTTCAGCTCACATTCAAGAACAGGTGAAGAATTTAGTGGAAAACAACTAAATCTTCGAAATACTACTCAGCGACAAAATCCAACTCAAGTTGAAGGAATGGATTCCCCAGTAATTTTATCAAGAAAATCTTTTCCACACAGGAGACAAAGTTCAATAGGAGAAGAGCAATCATTTTCCAGCTCCCCTGCAACTCCAGCATACATGGCTGCAACAGAATCAGCAAGAGCAAAAGCAAGATCAACAAGCTCACCGAAAGCAAGGTCGTGGAACTATGACATGAACTCTGATAGCTATTTGTCACCTAGCAAGAAAAAGTTATCAATTGTTTCATCTGTTAACAGTGAAGTGGTTAGTAATGGTGGTAGAATGGGGAAGCTTAATGGTTGTAACCAGCAAAGATCTCCGAGTTTTAAGGGTATTTCAGTACCTATAAAATCGAGCAGAAGTATAAAGGATCTTAGCATTAATTCAGATTGCTCATTGTCTAATTGGGATAGACAAAGTTCCTTTAAATGA 1350 0.3867 MAKKKKSWFNLVKRLFIWETHSTQEKKEKRRKWIFGKLKTKKLPSITAPTTTTNEAEEEEKSKHSQVMLNEVSQSAYQKNQDSSEESEPVKTRNGVPQSVYLYQMEIQEFAAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAMSTLKSLQSIVSIQSKICARRLQMVEGRWDSVEDEEIHYSKDKIIRMDSNSERKWDDSTLLKEEVDASCMIKKEAIIKRERIKEYTFNHRRSAESERGKVNGRWRYWLEQWVDTQLSKSKELEDLDSVFSSHSRTGEEFSGKQLNLRNTTQRQNPTQVEGMDSPVILSRKSFPHRRQSSIGEEQSFSSSPATPAYMAATESARAKARSTSSPKARSWNYDMNSDSYLSPSKKKLSIVSSVNSEVVSNGGRMGKLNGCNQQRSPSFKGISVPIKSSRSIKDLSINSDCSLSNWDRQSSFK 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01615 449 MobiDBLite consensus disorder prediction 282 378 - -
Vivi5g01615 449 MobiDBLite consensus disorder prediction 353 378 - -
Vivi5g01615 449 MobiDBLite consensus disorder prediction 45 66 - -
Vivi5g01615 449 PANTHER IQ-DOMAIN 5-RELATED 1 385 - -
Vivi5g01615 449 MobiDBLite consensus disorder prediction 322 345 - -
Vivi5g01615 449 Pfam IQ calmodulin-binding motif 111 129 IPR000048 GO:0005515
Vivi5g01615 449 MobiDBLite consensus disorder prediction 282 311 - -
Vivi5g01615 449 Pfam Protein of unknown function (DUF4005) 328 401 IPR025064 -
Vivi5g01615 449 Gene3D - 105 159 - -
Vivi5g01615 449 ProSiteProfiles IQ motif profile. 108 136 IPR000048 GO:0005515
Vivi5g01615 449 MobiDBLite consensus disorder prediction 400 419 - -
Vivi5g01615 449 ProSiteProfiles IQ motif profile. 132 159 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01615 Vivi-Chr5 52430082 52433189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01615 4 449 IQD Protein Family AT5G13460 48.837 5.60e-116 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01615 - - gmx:100800192 615.15